RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W YAR066WP0CX18 203 aa8.39□□□□□ -1.07
AMF1YOR378W YHR214WP0CX19 203 aa8.39□□□□□ -1.07
AMF1YOR378W OXP1P28273 1286 aa8.39□□□□□ -1.07
AMF1YOR378W CCR4P31384 837 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W RPF2P36160 344 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W RIM11P38615 370 aa8.39□□□□□ -1.07
AMF1YOR378W FRT2P39734 528 aa8.39□□□□□ -1.07
AMF1YOR378W YER034WP40022 185 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W TMA22P47089 198 aaPredicted RBP8.39□□□□□ -1.07
AMF1YOR378W NBP35P52920 328 aa8.39□□□□□ -1.07
AMF1YOR378W CUS2P53830 285 aaPredicted RBP8.39□□□□□ -1.07
AMF1YOR378W GTR1Q00582 310 aa8.39□□□□□ -1.07
AMF1YOR378W YML131WQ03102 365 aa8.39□□□□□ -1.07
AMF1YOR378W BCH1Q05029 724 aa8.39□□□□□ -1.07
AMF1YOR378W RIF2Q06208 395 aa8.39□□□□□ -1.07
AMF1YOR378W GRS2Q06817 618 aa8.39□□□□□ -1.07
AMF1YOR378W YDL121CQ07541 149 aa8.39□□□□□ -1.07
AMF1YOR378W SAM4Q08985 325 aaKnown RBP8.39□□□□□ -1.07
AMF1YOR378W CAR1P00812 333 aaKnown RBP8.38□□□□□ -1.07
AMF1YOR378W SWI5P08153 709 aa8.38□□□□□ -1.07
AMF1YOR378W SPT15P13393 240 aaKnown RBP8.38□□□□□ -1.07
AMF1YOR378W PMR1P13586 950 aa8.38□□□□□ -1.07
AMF1YOR378W RSC6P25632 483 aa8.38□□□□□ -1.07
AMF1YOR378W GIP1P38229 639 aa8.38□□□□□ -1.07
AMF1YOR378W CCT6P39079 546 aa8.38□□□□□ -1.07
AMF1YOR378W SCS2P40075 244 aaKnown RBP8.38□□□□□ -1.07
AMF1YOR378W LSM5P40089 93 aaKnown RBP8.38□□□□□ -1.07
AMF1YOR378W UTP18P40362 594 aaPredicted RBP8.38□□□□□ -1.07
AMF1YOR378W TIS11P47977 285 aa8.38□□□□□ -1.07
AMF1YOR378W YNL010WP53981 241 aaKnown RBP8.38□□□□□ -1.07
AMF1YOR378W YPL109CQ02981 657 aa8.38□□□□□ -1.07
AMF1YOR378W JIP5Q06214 492 aaPredicted RBP8.38□□□□□ -1.07
AMF1YOR378W YPL225WQ08971 146 aaKnown RBP8.38□□□□□ -1.07
AMF1YOR378W INH1P01097 85 aa8.37□□□□□ -1.07
AMF1YOR378W GUK1P15454 187 aaKnown RBP8.37□□□□□ -1.07
AMF1YOR378W RAD14P28519 371 aa8.37□□□□□ -1.07
AMF1YOR378W CRM1P30822 1084 aaKnown RBP8.37□□□□□ -1.07
AMF1YOR378W SPR1P32603 445 aa8.37□□□□□ -1.07
AMF1YOR378W NPT1P39683 429 aaKnown RBP8.37□□□□□ -1.07
AMF1YOR378W YJR154WP47181 346 aa8.37□□□□□ -1.07
AMF1YOR378W COQ5P49017 307 aa8.37□□□□□ -1.07
AMF1YOR378W ZRG17P53735 605 aa8.37□□□□□ -1.07
AMF1YOR378W GAS3Q03655 524 aa8.37□□□□□ -1.07
AMF1YOR378W YDR338CQ05497 695 aa8.37□□□□□ -1.07
AMF1YOR378W TRM8Q12009 286 aa8.37□□□□□ -1.07
AMF1YOR378W VPS68Q12016 184 aa8.37□□□□□ -1.07
AMF1YOR378W BEM2P39960 2167 aaKnown RBP8.36□□□□□ -1.07
AMF1YOR378W CDC21P06785 304 aa8.36□□□□□ -1.07
AMF1YOR378W MET8P15807 274 aa8.36□□□□□ -1.07
AMF1YOR378W PRP6P19735 899 aaPredicted RBP8.36□□□□□ -1.07
AMF1YOR378W VPS34P22543 875 aa8.36□□□□□ -1.07
AMF1YOR378W BUB2P26448 306 aaPredicted RBP8.36□□□□□ -1.07
AMF1YOR378W COX13P32799 129 aa8.36□□□□□ -1.07
AMF1YOR378W RPS1AP33442 255 aaKnown RBP8.36□□□□□ -1.07
AMF1YOR378W SIP2P34164 415 aaKnown RBP8.36□□□□□ -1.07
AMF1YOR378W HXT5P38695 592 aa8.36□□□□□ -1.07
AMF1YOR378W SPF1P39986 1215 aaKnown RBP8.36□□□□□ -1.07
AMF1YOR378W EMP65P40085 556 aa8.36□□□□□ -1.07
AMF1YOR378W CCT7P42943 550 aaKnown RBP8.36□□□□□ -1.07
AMF1YOR378W NNF2P53253 936 aa8.36□□□□□ -1.07
AMF1YOR378W HST3P53687 447 aa8.36□□□□□ -1.07
AMF1YOR378W CWC24P53769 259 aa8.36□□□□□ -1.07
AMF1YOR378W GTB1Q04924 702 aa8.36□□□□□ -1.07
AMF1YOR378W ESA1Q08649 445 aa8.36□□□□□ -1.07
AMF1YOR378W GPB1Q08886 897 aa8.36□□□□□ -1.07
AMF1YOR378W NAG1Q8TGN9 163 aa8.36□□□□□ -1.07
AMF1YOR378W SPT3P06844 337 aa8.35□□□□□ -1.07
AMF1YOR378W YSR3P23501 404 aa8.35□□□□□ -1.07
AMF1YOR378W HCM1P25364 564 aa8.35□□□□□ -1.07
AMF1YOR378W ATP11P32453 318 aa8.35□□□□□ -1.07
AMF1YOR378W PDB1P32473 366 aaKnown RBP8.35□□□□□ -1.07
AMF1YOR378W RML2P32611 393 aa8.35□□□□□ -1.07
AMF1YOR378W TCD2P36101 447 aaKnown RBP8.35□□□□□ -1.07
AMF1YOR378W YJL070CP40361 888 aa8.35□□□□□ -1.07
AMF1YOR378W RLP7P40693 322 aaKnown RBP8.35□□□□□ -1.07
AMF1YOR378W BIR1P47134 954 aa8.35□□□□□ -1.07
AMF1YOR378W USE1P53146 245 aa8.35□□□□□ -1.07
AMF1YOR378W MPS2P53159 387 aa8.35□□□□□ -1.07
AMF1YOR378W SNO2P53823 222 aa8.35□□□□□ -1.07
AMF1YOR378W NIS1P53939 407 aa8.35□□□□□ -1.07
AMF1YOR378W YPL113CQ02961 396 aa8.35□□□□□ -1.07
AMF1YOR378W YLR049CQ12110 428 aa8.35□□□□□ -1.07
AMF1YOR378W YOL087CQ99247 1116 aa8.35□□□□□ -1.07
AMF1YOR378W TUB1P09733 447 aaKnown RBP8.34□□□□□ -1.07
AMF1YOR378W COS2P0CX12 379 aa8.34□□□□□ -1.07
AMF1YOR378W COS3P0CX13 379 aa8.34□□□□□ -1.07
AMF1YOR378W DBR1P24309 405 aaKnown RBP8.34□□□□□ -1.07
AMF1YOR378W MLS1P30952 554 aa8.34□□□□□ -1.07
AMF1YOR378W SSE1P32589 693 aaKnown RBP8.34□□□□□ -1.07
AMF1YOR378W TSC10P38342 320 aa8.34□□□□□ -1.07
AMF1YOR378W RRP3P38712 501 aaKnown RBP8.34□□□□□ -1.07
AMF1YOR378W ARN1P38731 627 aa8.34□□□□□ -1.07
AMF1YOR378W BAT1P38891 393 aaKnown RBP8.34□□□□□ -1.07
AMF1YOR378W YEN1P40028 759 aa8.34□□□□□ -1.07
AMF1YOR378W FKH2P41813 862 aa8.34□□□□□ -1.07
AMF1YOR378W COS4P43542 379 aa8.34□□□□□ -1.07
AMF1YOR378W REX2P54964 269 aaKnown RBP8.34□□□□□ -1.07
AMF1YOR378W YLL032CQ07834 825 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
AMF1YOR378W PST1Q12355 444 aa8.34□□□□□ -1.07
AMF1YOR378W TRP3P00937 484 aa8.34□□□□□ -1.08
Retrieved 100 of 5,963 RNA–protein pairs in 122.9 ms