RNA–Protein interactions for RNA: YNL197C

WHI3, Transcript of RNA binding protein that sequesters CLN3 mRNA in cytoplasmic foci, yeastyeast

Gene WHI3, Length 1,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
WHI3YNL197C GAL4P04386 881 aa3.54□□□□□ -1.84
WHI3YNL197C ART10P18634 518 aaKnown RBP3.54□□□□□ -1.84
WHI3YNL197C ECM32P32644 1121 aaKnown RBP3.54□□□□□ -1.84
WHI3YNL197C GCS1P35197 352 aa3.54□□□□□ -1.84
WHI3YNL197C MIA40P36046 403 aa3.54□□□□□ -1.84
WHI3YNL197C YJL068CP40363 299 aa3.54□□□□□ -1.84
WHI3YNL197C PYK2P52489 506 aaKnown RBP3.54□□□□□ -1.84
WHI3YNL197C BNI5P53890 448 aaKnown RBP3.54□□□□□ -1.84
WHI3YNL197C FRE3Q08905 711 aa3.54□□□□□ -1.84
WHI3YNL197C NCE102Q12207 173 aaRIP-Chip data3.54□□□□□ -1.84not detected
WHI3YNL197C SMC6Q12749 1114 aa3.54□□□□□ -1.84
WHI3YNL197C APN1P22936 367 aa3.53□□□□□ -1.84
WHI3YNL197C YKL100CP34248 587 aa3.53□□□□□ -1.84
WHI3YNL197C STB6P36085 766 aa3.53□□□□□ -1.84
WHI3YNL197C SRP72P38688 640 aaKnown RBP3.53□□□□□ -1.84
WHI3YNL197C RIX1P38883 763 aaPredicted RBP3.53□□□□□ -1.84
WHI3YNL197C STU2P46675 888 aa3.53□□□□□ -1.84
WHI3YNL197C STB2P46679 850 aa3.53□□□□□ -1.84
WHI3YNL197C ERG26P53199 349 aaKnown RBP3.53□□□□□ -1.84
WHI3YNL197C NNF2P53253 936 aa3.53□□□□□ -1.84
WHI3YNL197C YDR239CQ03780 787 aa3.53□□□□□ -1.84
WHI3YNL197C ERB1Q04660 807 aaKnown RBP3.53□□□□□ -1.84
WHI3YNL197C PDR8Q06149 701 aa3.53□□□□□ -1.84
WHI3YNL197C YLR352WQ06479 807 aa3.53□□□□□ -1.84
WHI3YNL197C SEC39Q12745 709 aa3.53□□□□□ -1.84
WHI3YNL197C PUT2P07275 575 aa3.52□□□□□ -1.85
WHI3YNL197C CLB3P24870 427 aa3.52□□□□□ -1.85
WHI3YNL197C BUD5P25300 642 aaPredicted RBP3.52□□□□□ -1.85
WHI3YNL197C MSS51P32335 436 aa3.52□□□□□ -1.85
WHI3YNL197C HXT9P40885 567 aa3.52□□□□□ -1.85
WHI3YNL197C YGR127WP53275 312 aa3.52□□□□□ -1.85
WHI3YNL197C RMT2Q03305 412 aa3.52□□□□□ -1.85
WHI3YNL197C ATG26Q06321 1198 aa3.52□□□□□ -1.85
WHI3YNL197C YLR049CQ12110 428 aa3.52□□□□□ -1.85
WHI3YNL197C YDL007C-AQ2V2Q0 85 aa3.52□□□□□ -1.85
WHI3YNL197C BOS1P25385 244 aa3.52□□□□□ -1.85
WHI3YNL197C URA7P28274 579 aaKnown RBP3.52□□□□□ -1.85
WHI3YNL197C PPZ2P33329 710 aa3.52□□□□□ -1.85
WHI3YNL197C MTR2P34232 184 aaKnown RBP3.52□□□□□ -1.85
WHI3YNL197C LEU5P38702 357 aa3.52□□□□□ -1.85
WHI3YNL197C UBA4P38820 440 aa3.52□□□□□ -1.85
WHI3YNL197C HXT14P42833 540 aa3.52□□□□□ -1.85
WHI3YNL197C IRC7P43623 340 aa3.52□□□□□ -1.85
WHI3YNL197C AIM22P47051 409 aa3.52□□□□□ -1.85
WHI3YNL197C PKP2P53170 491 aa3.52□□□□□ -1.85
WHI3YNL197C DRN1P53255 507 aaKnown RBP3.52□□□□□ -1.85
WHI3YNL197C ATP23P53722 227 aa3.52□□□□□ -1.85
WHI3YNL197C SXM1Q04175 944 aaKnown RBP3.52□□□□□ -1.85
WHI3YNL197C EMI2Q04409 500 aaKnown RBP3.52□□□□□ -1.85
WHI3YNL197C APL4Q12028 832 aa3.52□□□□□ -1.85
WHI3YNL197C YRF1-4O13559 1382 aa3.51□□□□□ -1.85
WHI3YNL197C HSP82P02829 709 aaKnown RBP3.51□□□□□ -1.85
WHI3YNL197C SPE2P21182 396 aa3.51□□□□□ -1.85
WHI3YNL197C DBF4P32325 704 aa3.51□□□□□ -1.85
WHI3YNL197C HXT3P32466 567 aaKnown RBP3.51□□□□□ -1.85
WHI3YNL197C PXA2P34230 853 aa3.51□□□□□ -1.85
WHI3YNL197C BLI1P35727 113 aa3.51□□□□□ -1.85
WHI3YNL197C MSR1P38714 643 aa3.51□□□□□ -1.85
WHI3YNL197C DBP8P38719 431 aa3.51□□□□□ -1.85
WHI3YNL197C NMD5P46970 1048 aa3.51□□□□□ -1.85
WHI3YNL197C RSM23Q01163 450 aa3.51□□□□□ -1.85
WHI3YNL197C SLK19Q08581 821 aaKnown RBP3.51□□□□□ -1.85
WHI3YNL197C YMR085WP0CF18 432 aa3.51□□□□□ -1.85
WHI3YNL197C SGV1P23293 657 aaKnown RBP3.51□□□□□ -1.85
WHI3YNL197C ILV6P25605 309 aaKnown RBP3.51□□□□□ -1.85
WHI3YNL197C OTU2P38747 307 aaKnown RBP3.51□□□□□ -1.85
WHI3YNL197C YIL060WP40519 144 aa3.51□□□□□ -1.85
WHI3YNL197C ULP2P40537 1034 aaPredicted RBP3.51□□□□□ -1.85
WHI3YNL197C YMR160WQ03823 816 aa3.51□□□□□ -1.85
WHI3YNL197C CAC2Q04199 468 aa3.51□□□□□ -1.85
WHI3YNL197C ROY1Q04847 553 aa3.51□□□□□ -1.85
WHI3YNL197C CBP1P07252 654 aa3.5□□□□□ -1.85
WHI3YNL197C TUB1P09733 447 aaKnown RBP3.5□□□□□ -1.85
WHI3YNL197C CNA1P23287 553 aa3.5□□□□□ -1.85
WHI3YNL197C CLB1P24868 471 aa3.5□□□□□ -1.85
WHI3YNL197C YCR051WP25631 222 aa3.5□□□□□ -1.85
WHI3YNL197C COQ3P27680 312 aa3.5□□□□□ -1.85
WHI3YNL197C GAC1P28006 793 aa3.5□□□□□ -1.85
WHI3YNL197C PEX5P35056 612 aa3.5□□□□□ -1.85
WHI3YNL197C RPL32P38061 130 aaKnown RBP3.5□□□□□ -1.85
WHI3YNL197C THI2P38141 450 aa3.5□□□□□ -1.85
WHI3YNL197C PTR3P43606 678 aa3.5□□□□□ -1.85
WHI3YNL197C TCB2P48231 1178 aa3.5□□□□□ -1.85
WHI3YNL197C SLG1P54867 378 aa3.5□□□□□ -1.85
WHI3YNL197C RSC9Q03124 581 aa3.5□□□□□ -1.85
WHI3YNL197C PDS5Q04264 1277 aa3.5□□□□□ -1.85
WHI3YNL197C SOV1Q04748 898 aa3.5□□□□□ -1.85
WHI3YNL197C CDC60P26637 1090 aaKnown RBP3.49□□□□□ -1.85
WHI3YNL197C YME1P32795 747 aa3.49□□□□□ -1.85
WHI3YNL197C ICS2P38284 255 aa3.49□□□□□ -1.85
WHI3YNL197C KEL1P38853 1164 aaKnown RBP3.49□□□□□ -1.85
WHI3YNL197C CIN4P39110 191 aa3.49□□□□□ -1.85
WHI3YNL197C YMR147WP40218 223 aaKnown RBP3.49□□□□□ -1.85
WHI3YNL197C DLD2P46681 530 aaKnown RBP3.49□□□□□ -1.85
WHI3YNL197C SWF1Q04629 336 aa3.49□□□□□ -1.85
WHI3YNL197C ECM30Q06673 1274 aa3.49□□□□□ -1.85
WHI3YNL197C ISA2Q12425 185 aa3.49□□□□□ -1.85
WHI3YNL197C YPT1P01123 206 aaKnown RBP3.49□□□□□ -1.85
WHI3YNL197C ARG81P05085 880 aa3.49□□□□□ -1.85
WHI3YNL197C PEP4P07267 405 aaKnown RBP3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 7.7 ms