RNA–Protein interactions for RNA: YMR173W

DDR48, Transcript of DNA damage-responsive protein, yeastyeast

Gene DDR48, Length 1,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DDR48YMR173W VID22Q05934 901 aa2.72□□□□□ -1.97
DDR48YMR173W SKG3Q06315 1026 aa2.72□□□□□ -1.97
DDR48YMR173W SSK1Q07084 712 aa2.72□□□□□ -1.97
DDR48YMR173W FMP45Q07651 309 aa2.72□□□□□ -1.97
DDR48YMR173W YLR302CO13544 120 aa2.71□□□□□ -1.98
DDR48YMR173W SNF1P06782 633 aaKnown RBP2.71□□□□□ -1.98
DDR48YMR173W GDH1P07262 454 aaKnown RBP2.71□□□□□ -1.98
DDR48YMR173W MTF1P14908 341 aaKnown RBP2.71□□□□□ -1.98
DDR48YMR173W PFK2P16862 959 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
DDR48YMR173W RPS2P25443 254 aaKnown RBP2.71□□□□□ -1.98
DDR48YMR173W SPC110P32380 944 aa2.71□□□□□ -1.98
DDR48YMR173W CBF2P32504 956 aa2.71□□□□□ -1.98
DDR48YMR173W CNS1P33313 385 aa2.71□□□□□ -1.98
DDR48YMR173W TIF5P38431 405 aaKnown RBP2.71□□□□□ -1.98
DDR48YMR173W ELO1P39540 310 aa2.71□□□□□ -1.98
DDR48YMR173W CSM2P40465 213 aa2.71□□□□□ -1.98
DDR48YMR173W MKT1P40850 830 aaKnown RBP2.71□□□□□ -1.98
DDR48YMR173W SAP185P40856 1058 aa2.71□□□□□ -1.98
DDR48YMR173W YGL242CP53066 181 aa2.71□□□□□ -1.98
DDR48YMR173W SHE10P53075 577 aa2.71□□□□□ -1.98
DDR48YMR173W RHO4Q00246 291 aa2.71□□□□□ -1.98
DDR48YMR173W YMR160WQ03823 816 aa2.71□□□□□ -1.98
DDR48YMR173W RPS10AQ08745 105 aaPredicted RBP2.71□□□□□ -1.98
DDR48YMR173W TRM8Q12009 286 aa2.71□□□□□ -1.98
DDR48YMR173W PDH1Q12428 516 aaKnown RBP2.71□□□□□ -1.98
DDR48YMR173W REV1P12689 985 aa2.7□□□□□ -1.98
DDR48YMR173W PWP1P21304 576 aaKnown RBP2.7□□□□□ -1.98
DDR48YMR173W BUD5P25300 642 aaPredicted RBP2.7□□□□□ -1.98
DDR48YMR173W ADH7P25377 361 aa2.7□□□□□ -1.98
DDR48YMR173W NDC1P32500 655 aa2.7□□□□□ -1.98
DDR48YMR173W SIP2P34164 415 aaKnown RBP2.7□□□□□ -1.98
DDR48YMR173W YNK1P36010 153 aaKnown RBP2.7□□□□□ -1.98
DDR48YMR173W PSY4P38193 441 aa2.7□□□□□ -1.98
DDR48YMR173W YBP1P38315 674 aa2.7□□□□□ -1.98
DDR48YMR173W DBP8P38719 431 aa2.7□□□□□ -1.98
DDR48YMR173W ANS1P38832 159 aa2.7□□□□□ -1.98
DDR48YMR173W FMP10P40098 244 aa2.7□□□□□ -1.98
DDR48YMR173W RPR2P40571 144 aa2.7□□□□□ -1.98
DDR48YMR173W SPG5P42933 373 aa2.7□□□□□ -1.98
DDR48YMR173W DIC1Q06143 298 aa2.7□□□□□ -1.98
DDR48YMR173W PSR1Q07800 427 aa2.7□□□□□ -1.98
DDR48YMR173W SDH5Q08230 162 aa2.7□□□□□ -1.98
DDR48YMR173W LEU9Q12166 604 aaKnown RBP2.7□□□□□ -1.98
DDR48YMR173W YOL087CQ99247 1116 aa2.7□□□□□ -1.98
DDR48YMR173W MCK1P21965 375 aaKnown RBP2.69□□□□□ -1.98
DDR48YMR173W SAC6P32599 642 aaKnown RBP2.69□□□□□ -1.98
DDR48YMR173W MTR2P34232 184 aaKnown RBP2.69□□□□□ -1.98
DDR48YMR173W ALY1P36117 915 aa2.69□□□□□ -1.98
DDR48YMR173W IES5P40060 125 aa2.69□□□□□ -1.98
DDR48YMR173W IDP2P41939 412 aa2.69□□□□□ -1.98
DDR48YMR173W DIA3P52290 468 aa2.69□□□□□ -1.98
DDR48YMR173W YMR087WQ04299 284 aa2.69□□□□□ -1.98
DDR48YMR173W NBP2Q12163 236 aa2.69□□□□□ -1.98
DDR48YMR173W SET6Q12529 373 aa2.69□□□□□ -1.98
DDR48YMR173W SSM4P40318 1319 aa2.68□□□□□ -1.98
DDR48YMR173W AMD1P15274 810 aaKnown RBP2.68□□□□□ -1.98
DDR48YMR173W SEC62P21825 274 aa2.68□□□□□ -1.98
DDR48YMR173W ATS1P31386 333 aa2.68□□□□□ -1.98
DDR48YMR173W AGA1P32323 725 aa2.68□□□□□ -1.98
DDR48YMR173W TIF3P34167 436 aaKnown RBP2.68□□□□□ -1.98
DDR48YMR173W SWH1P35845 1188 aa2.68□□□□□ -1.98
DDR48YMR173W ROT2P38138 954 aa2.68□□□□□ -1.98
DDR48YMR173W YER010CP40011 234 aa2.68□□□□□ -1.98
DDR48YMR173W BUR6P40096 142 aa2.68□□□□□ -1.98
DDR48YMR173W YFR016CP43597 1233 aaKnown RBP2.68□□□□□ -1.98
DDR48YMR173W BNA5Q05979 453 aa2.68□□□□□ -1.98
DDR48YMR173W GRC3Q07845 632 aa2.68□□□□□ -1.98
DDR48YMR173W ATR1P13090 542 aa2.67□□□□□ -1.98
DDR48YMR173W PMR1P13586 950 aa2.67□□□□□ -1.98
DDR48YMR173W PTR2P32901 601 aa2.67□□□□□ -1.98
DDR48YMR173W SIP4P46954 829 aa2.67□□□□□ -1.98
DDR48YMR173W ALT2P52892 507 aa2.67□□□□□ -1.98
DDR48YMR173W YGR021WP53212 290 aa2.67□□□□□ -1.98
DDR48YMR173W EFM6P53970 246 aa2.67□□□□□ -1.98
DDR48YMR173W YPL014WQ02606 381 aa2.67□□□□□ -1.98
DDR48YMR173W YPL272CQ08984 517 aa2.67□□□□□ -1.98
DDR48YMR173W AYT1Q12226 474 aa2.67□□□□□ -1.98
DDR48YMR173W RPL20AP0CX23 172 aaKnown RBP2.66□□□□□ -1.98
DDR48YMR173W RPL20BP0CX24 172 aaPredicted RBP2.66□□□□□ -1.98
DDR48YMR173W YKL100CP34248 587 aa2.66□□□□□ -1.98
DDR48YMR173W MTC4P38335 694 aaKnown RBP2.66□□□□□ -1.98
DDR48YMR173W PCA1P38360 1216 aa2.66□□□□□ -1.98
DDR48YMR173W RPS7BP48164 190 aaKnown RBP2.66□□□□□ -1.98
DDR48YMR173W APT1P49435 187 aaKnown RBP2.66□□□□□ -1.98
DDR48YMR173W GTR1Q00582 310 aa2.66□□□□□ -1.98
DDR48YMR173W RSM23Q01163 450 aa2.66□□□□□ -1.98
DDR48YMR173W RIX7Q07844 837 aaKnown RBP2.66□□□□□ -1.98
DDR48YMR173W TEN1Q07921 160 aa2.66□□□□□ -1.98
DDR48YMR173W HEM2P05373 342 aa2.65□□□□□ -1.99
DDR48YMR173W PEP5P12868 1029 aa2.65□□□□□ -1.99
DDR48YMR173W SGV1P23293 657 aaKnown RBP2.65□□□□□ -1.99
DDR48YMR173W VMA16P23968 213 aa2.65□□□□□ -1.99
DDR48YMR173W PUP3P25451 205 aaKnown RBP2.65□□□□□ -1.99
DDR48YMR173W LDB16P25587 256 aa2.65□□□□□ -1.99
DDR48YMR173W SYN8P31377 255 aa2.65□□□□□ -1.99
DDR48YMR173W NUP133P36161 1157 aa2.65□□□□□ -1.99
DDR48YMR173W AXL2P38928 823 aa2.65□□□□□ -1.99
DDR48YMR173W KAP123P40069 1113 aaKnown RBP2.65□□□□□ -1.99
DDR48YMR173W FAR3P46671 204 aa2.65□□□□□ -1.99
DDR48YMR173W ARC1P46672 376 aaKnown RBP2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 24.2 ms