RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C CMR1Q12510 522 aaKnown RBP9.05□□□□□ -0.96
SEC61YLR378C SAS5Q99314 248 aa9.05□□□□□ -0.96
SEC61YLR378C CPA1P07258 411 aaKnown RBP9.04□□□□□ -0.96
SEC61YLR378C MSF1P08425 469 aa9.04□□□□□ -0.96
SEC61YLR378C RPS1AP33442 255 aaKnown RBP9.04□□□□□ -0.96
SEC61YLR378C YPT52P36018 234 aaKnown RBP9.04□□□□□ -0.96
SEC61YLR378C DBP8P38719 431 aa9.04□□□□□ -0.96
SEC61YLR378C SSN3P39073 555 aa9.04□□□□□ -0.96
SEC61YLR378C OSW5P40219 148 aa9.04□□□□□ -0.96
SEC61YLR378C MET18P40469 1032 aa9.04□□□□□ -0.96
SEC61YLR378C COG7P53195 279 aa9.04□□□□□ -0.96
SEC61YLR378C COS6P53344 381 aa9.04□□□□□ -0.96
SEC61YLR378C PRO2P54885 456 aaKnown RBP9.04□□□□□ -0.96
SEC61YLR378C BCH1Q05029 724 aa9.04□□□□□ -0.96
SEC61YLR378C RSC3Q06639 885 aa9.04□□□□□ -0.96
SEC61YLR378C UAF30Q08747 228 aa9.04□□□□□ -0.96
SEC61YLR378C YLR049CQ12110 428 aa9.04□□□□□ -0.96
SEC61YLR378C RPL24AP04449 155 aaKnown RBP9.03□□□□□ -0.96
SEC61YLR378C GUK1P15454 187 aaKnown RBP9.03□□□□□ -0.96
SEC61YLR378C FPR1P20081 114 aaKnown RBP9.03□□□□□ -0.96
SEC61YLR378C BET2P20133 325 aa9.03□□□□□ -0.96
SEC61YLR378C EPT1P22140 391 aa9.03□□□□□ -0.96
SEC61YLR378C HES1P35843 434 aa9.03□□□□□ -0.96
SEC61YLR378C DCW1P36091 449 aa9.03□□□□□ -0.96
SEC61YLR378C YBL029WP38201 376 aa9.03□□□□□ -0.96
SEC61YLR378C FKH2P41813 862 aa9.03□□□□□ -0.96
SEC61YLR378C MDJ2P42834 146 aa9.03□□□□□ -0.96
SEC61YLR378C YFR018CP43599 363 aa9.03□□□□□ -0.96
SEC61YLR378C MTR3P48240 250 aaPredicted RBP9.03□□□□□ -0.96
SEC61YLR378C IMA1P53051 589 aa9.03□□□□□ -0.96
SEC61YLR378C NMA2P53204 395 aa9.03□□□□□ -0.96
SEC61YLR378C YGR053CP53234 283 aa9.03□□□□□ -0.96
SEC61YLR378C ATG26Q06321 1198 aa9.03□□□□□ -0.96
SEC61YLR378C HBT1Q07653 1046 aaKnown RBP9.03□□□□□ -0.96
SEC61YLR378C RUP1Q12242 671 aa9.03□□□□□ -0.96
SEC61YLR378C ADF1Q2V2Q1 113 aa9.03□□□□□ -0.96
SEC61YLR378C MPD2Q99316 277 aa9.03□□□□□ -0.96
SEC61YLR378C RPS9AO13516 197 aaKnown RBP9.02□□□□□ -0.97
SEC61YLR378C SEC63P14906 663 aa9.02□□□□□ -0.97
SEC61YLR378C IMG2P25642 146 aaPredicted RBP9.02□□□□□ -0.97
SEC61YLR378C CSM1P25651 190 aa9.02□□□□□ -0.97
SEC61YLR378C CRM1P30822 1084 aaKnown RBP9.02□□□□□ -0.97
SEC61YLR378C ATP7P30902 174 aa9.02□□□□□ -0.97
SEC61YLR378C LRG1P35688 1017 aa9.02□□□□□ -0.97
SEC61YLR378C MAM33P40513 266 aa9.02□□□□□ -0.97
SEC61YLR378C DIM1P41819 318 aaKnown RBP9.02□□□□□ -0.97
SEC61YLR378C RMD8P43620 662 aa9.02□□□□□ -0.97
SEC61YLR378C MPS3P47069 682 aa9.02□□□□□ -0.97
SEC61YLR378C TGL2P54857 326 aa9.02□□□□□ -0.97
SEC61YLR378C ATP25Q03153 612 aa9.02□□□□□ -0.97
SEC61YLR378C TRM12Q04235 462 aa9.02□□□□□ -0.97
SEC61YLR378C DYN3Q04949 312 aa9.02□□□□□ -0.97
SEC61YLR378C MCH5Q08777 521 aa9.02□□□□□ -0.97
SEC61YLR378C GPB1Q08886 897 aa9.02□□□□□ -0.97
SEC61YLR378C SMF3Q12078 473 aaPredicted RBP9.02□□□□□ -0.97
SEC61YLR378C NSL1Q12143 216 aa9.02□□□□□ -0.97
SEC61YLR378C NHA1Q99271 985 aa9.02□□□□□ -0.97
SEC61YLR378C PHO91P27514 894 aa9.01□□□□□ -0.97
SEC61YLR378C FRE2P36033 711 aa9.01□□□□□ -0.97
SEC61YLR378C NPT1P39683 429 aaKnown RBP9.01□□□□□ -0.97
SEC61YLR378C GCD10P41814 478 aa9.01□□□□□ -0.97
SEC61YLR378C NAS6P50086 228 aa9.01□□□□□ -0.97
SEC61YLR378C CDC21P06785 304 aa9□□□□□ -0.97
SEC61YLR378C SPT3P06844 337 aa9□□□□□ -0.97
SEC61YLR378C YAR066WP0CX18 203 aa9□□□□□ -0.97
SEC61YLR378C YHR214WP0CX19 203 aa9□□□□□ -0.97
SEC61YLR378C SAN1P22470 610 aa9□□□□□ -0.97
SEC61YLR378C MEF1P25039 761 aa9□□□□□ -0.97
SEC61YLR378C PHO84P25297 587 aaKnown RBP9□□□□□ -0.97
SEC61YLR378C CCR4P31384 837 aaKnown RBP9□□□□□ -0.97
SEC61YLR378C GUT1P32190 709 aa9□□□□□ -0.97
SEC61YLR378C TFC1P32367 649 aa9□□□□□ -0.97
SEC61YLR378C CSE1P33307 960 aa9□□□□□ -0.97
SEC61YLR378C CAF4P36130 643 aa9□□□□□ -0.97
SEC61YLR378C YHR020WP38708 688 aaKnown RBP9□□□□□ -0.97
SEC61YLR378C HSE1P38753 452 aa9□□□□□ -0.97
SEC61YLR378C CYC2P38909 366 aa9□□□□□ -0.97
SEC61YLR378C TIM17P39515 158 aa9□□□□□ -0.97
SEC61YLR378C SPF1P39986 1215 aaKnown RBP9□□□□□ -0.97
SEC61YLR378C EMP65P40085 556 aa9□□□□□ -0.97
SEC61YLR378C UTP18P40362 594 aaPredicted RBP9□□□□□ -0.97
SEC61YLR378C HPM1P40481 377 aa9□□□□□ -0.97
SEC61YLR378C GAT1P43574 510 aa9□□□□□ -0.97
SEC61YLR378C YGL108CP53139 140 aa9□□□□□ -0.97
SEC61YLR378C PRP38Q00723 242 aaPredicted RBP9□□□□□ -0.97
SEC61YLR378C ARX1Q03862 593 aaKnown RBP9□□□□□ -0.97
SEC61YLR378C HMO1Q03973 246 aaKnown RBP9□□□□□ -0.97
SEC61YLR378C YLR413WQ06689 675 aa9□□□□□ -0.97
SEC61YLR378C GRS2Q06817 618 aa9□□□□□ -0.97
SEC61YLR378C CET1O13297 549 aaPredicted RBP8.99□□□□□ -0.97
SEC61YLR378C TPK2P06245 380 aa8.99□□□□□ -0.97
SEC61YLR378C RPS14AP06367 137 aaKnown RBP8.99□□□□□ -0.97
SEC61YLR378C FUS1P11710 512 aa8.99□□□□□ -0.97
SEC61YLR378C CCA1P21269 546 aa8.99□□□□□ -0.97
SEC61YLR378C PUP3P25451 205 aaKnown RBP8.99□□□□□ -0.97
SEC61YLR378C BUD14P27637 709 aa8.99□□□□□ -0.97
SEC61YLR378C PMT1P33775 817 aa8.99□□□□□ -0.97
SEC61YLR378C RPF2P36160 344 aaKnown RBP8.99□□□□□ -0.97
SEC61YLR378C GIP1P38229 639 aa8.99□□□□□ -0.97
SEC61YLR378C UBA4P38820 440 aa8.99□□□□□ -0.97
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms