RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeastyeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IFH1YLR223C YDL057WQ07379 328 aa1.42□□□□□ -2.18
IFH1YLR223C MF(ALPHA)1P01149 165 aa1.42□□□□□ -2.18
IFH1YLR223C SEC53P07283 254 aaKnown RBP1.42□□□□□ -2.18
IFH1YLR223C YFL068WP0CX99 160 aa1.42□□□□□ -2.18
IFH1YLR223C YLL066W-AP0CY00 160 aa1.42□□□□□ -2.18
IFH1YLR223C YLL067W-AP0CY01 160 aa1.42□□□□□ -2.18
IFH1YLR223C GLN3P18494 730 aa1.42□□□□□ -2.18
IFH1YLR223C SAN1P22470 610 aa1.42□□□□□ -2.18
IFH1YLR223C YBR139WP38109 508 aa1.42□□□□□ -2.18
IFH1YLR223C TMA108P40462 946 aa1.42□□□□□ -2.18
IFH1YLR223C DOT5P40553 215 aa1.42□□□□□ -2.18
IFH1YLR223C ARC1P46672 376 aaKnown RBP1.42□□□□□ -2.18
IFH1YLR223C HOS2P53096 452 aaPredicted RBP1.42□□□□□ -2.18
IFH1YLR223C TDA7P53882 636 aaPredicted RBP1.42□□□□□ -2.18
IFH1YLR223C YDR056CQ12025 205 aa1.42□□□□□ -2.18
IFH1YLR223C ARD1P07347 238 aaPredicted RBP1.41□□□□□ -2.18
IFH1YLR223C AAC3P18238 307 aa1.41□□□□□ -2.18
IFH1YLR223C CLB2P24869 491 aa1.41□□□□□ -2.18
IFH1YLR223C IMG1P25626 169 aa1.41□□□□□ -2.18
IFH1YLR223C PHD1P36093 366 aa1.41□□□□□ -2.18
IFH1YLR223C RIM2P38127 377 aa1.41□□□□□ -2.18
IFH1YLR223C REG2P38232 338 aa1.41□□□□□ -2.18
IFH1YLR223C UIP3P39547 235 aa1.41□□□□□ -2.18
IFH1YLR223C ROK1P45818 564 aaPredicted RBP1.41□□□□□ -2.18
IFH1YLR223C YMR160WQ03823 816 aa1.41□□□□□ -2.18
IFH1YLR223C YTH1Q06102 208 aaPredicted RBP1.41□□□□□ -2.18
IFH1YLR223C APL5Q08951 932 aaKnown RBP1.41□□□□□ -2.18
IFH1YLR223C BAR1P12630 587 aa1.41□□□□□ -2.18
IFH1YLR223C ADH7P25377 361 aa1.41□□□□□ -2.18
IFH1YLR223C BOS1P25385 244 aa1.41□□□□□ -2.18
IFH1YLR223C YIH1P25637 258 aa1.41□□□□□ -2.18
IFH1YLR223C PDB1P32473 366 aaKnown RBP1.41□□□□□ -2.18
IFH1YLR223C MIA40P36046 403 aa1.41□□□□□ -2.18
IFH1YLR223C RPL32P38061 130 aaKnown RBP1.41□□□□□ -2.18
IFH1YLR223C TSC10P38342 320 aa1.41□□□□□ -2.18
IFH1YLR223C SNG1P46950 547 aa1.41□□□□□ -2.18
IFH1YLR223C ERG26P53199 349 aaKnown RBP1.41□□□□□ -2.18
IFH1YLR223C YGR127WP53275 312 aa1.41□□□□□ -2.18
IFH1YLR223C RBG2P53295 368 aaKnown RBP1.41□□□□□ -2.18
IFH1YLR223C RPT6Q01939 405 aaKnown RBP1.41□□□□□ -2.18
IFH1YLR223C GLO2Q05584 274 aa1.41□□□□□ -2.18
IFH1YLR223C GID7P25569 745 aa1.41□□□□□ -2.18
IFH1YLR223C GAC1P28006 793 aa1.41□□□□□ -2.18
IFH1YLR223C SNU114P36048 1008 aaKnown RBP1.41□□□□□ -2.18
IFH1YLR223C MIC60P36112 540 aa1.41□□□□□ -2.18
IFH1YLR223C YND1P40009 630 aa1.41□□□□□ -2.18
IFH1YLR223C DSD1P53095 428 aa1.41□□□□□ -2.18
IFH1YLR223C PKP2P53170 491 aa1.41□□□□□ -2.18
IFH1YLR223C YPL014WQ02606 381 aa1.41□□□□□ -2.18
IFH1YLR223C RSF1Q05043 376 aa1.41□□□□□ -2.18
IFH1YLR223C BUD21Q08492 214 aaPredicted RBP1.41□□□□□ -2.18
IFH1YLR223C RPS10AQ08745 105 aaPredicted RBP1.41□□□□□ -2.18
IFH1YLR223C KGD1P20967 1014 aaKnown RBP1.4□□□□□ -2.19
IFH1YLR223C SEC62P21825 274 aa1.4□□□□□ -2.19
IFH1YLR223C CBF2P32504 956 aa1.4□□□□□ -2.19
IFH1YLR223C LAG1P38703 411 aa1.4□□□□□ -2.19
IFH1YLR223C ALG5P40350 334 aa1.4□□□□□ -2.19
IFH1YLR223C SGM1P47166 707 aa1.4□□□□□ -2.19
IFH1YLR223C YGR126WP53274 230 aa1.4□□□□□ -2.19
IFH1YLR223C NUP100Q02629 959 aa1.4□□□□□ -2.19
IFH1YLR223C SHR3Q02774 210 aa1.4□□□□□ -2.19
IFH1YLR223C NGL3Q03210 505 aa1.4□□□□□ -2.19
IFH1YLR223C TMA64Q04600 565 aaKnown RBP1.4□□□□□ -2.19
IFH1YLR223C DIC1Q06143 298 aa1.4□□□□□ -2.19
IFH1YLR223C LUC7Q07508 261 aaPredicted RBP1.4□□□□□ -2.19
IFH1YLR223C YML133CQ03099 1374 aa1.4□□□□□ -2.19
IFH1YLR223C YLL067CQ07888 1374 aa1.4□□□□□ -2.19
IFH1YLR223C YLL066CQ99208 1374 aa1.4□□□□□ -2.19
IFH1YLR223C ERG1P32476 496 aaKnown RBP1.4□□□□□ -2.19
IFH1YLR223C YBL055CP34220 418 aaPredicted RBP1.4□□□□□ -2.19
IFH1YLR223C YNG2P38806 282 aaKnown RBP1.4□□□□□ -2.19
IFH1YLR223C YIR014WP40570 242 aa1.4□□□□□ -2.19
IFH1YLR223C FET5P43561 622 aa1.4□□□□□ -2.19
IFH1YLR223C BUD32P53323 261 aa1.4□□□□□ -2.19
IFH1YLR223C INA17Q02888 182 aa1.4□□□□□ -2.19
IFH1YLR223C MSS11Q03825 758 aa1.4□□□□□ -2.19
IFH1YLR223C CDC45Q08032 650 aa1.4□□□□□ -2.19
IFH1YLR223C FMP40Q08968 688 aaPredicted RBP1.4□□□□□ -2.19
IFH1YLR223C YPT1P01123 206 aaKnown RBP1.39□□□□□ -2.19
IFH1YLR223C PUT2P07275 575 aa1.39□□□□□ -2.19
IFH1YLR223C MRP13P12686 339 aa1.39□□□□□ -2.19
IFH1YLR223C ACH1P32316 526 aa1.39□□□□□ -2.19
IFH1YLR223C PAH1P32567 862 aa1.39□□□□□ -2.19
IFH1YLR223C SEF1P34228 1148 aa1.39□□□□□ -2.19
IFH1YLR223C LEU5P38702 357 aa1.39□□□□□ -2.19
IFH1YLR223C PHO90P39535 881 aa1.39□□□□□ -2.19
IFH1YLR223C SIP4P46954 829 aa1.39□□□□□ -2.19
IFH1YLR223C VID30P53076 958 aa1.39□□□□□ -2.19
IFH1YLR223C PPT2Q12036 173 aa1.39□□□□□ -2.19
IFH1YLR223C DAP1Q12091 152 aa1.39□□□□□ -2.19
IFH1YLR223C PDH1Q12428 516 aaKnown RBP1.39□□□□□ -2.19
IFH1YLR223C PMS1P14242 873 aa1.39□□□□□ -2.19
IFH1YLR223C SUI2P20459 304 aaKnown RBP1.39□□□□□ -2.19
IFH1YLR223C SNC1P31109 117 aa1.39□□□□□ -2.19
IFH1YLR223C YBR144CP34215 104 aa1.39□□□□□ -2.19
IFH1YLR223C YKL100CP34248 587 aa1.39□□□□□ -2.19
IFH1YLR223C SGN1P40561 250 aaKnown RBP RIP-Chip data1.39□□□□□ -2.19not detected
IFH1YLR223C RPN11P43588 306 aaKnown RBP1.39□□□□□ -2.19
IFH1YLR223C FAR3P46671 204 aa1.39□□□□□ -2.19
IFH1YLR223C RPS10BP46784 105 aaKnown RBP1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms