RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	SUI2	P20459	304 aa	Known RBP	4.41	□□□□□ -1.7
EBP2	YKL172W	SGF29	P25554	259 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	IMG1	P25626	169 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	YBL055C	P34220	418 aa	Predicted RBP	4.41	□□□□□ -1.7
EBP2	YKL172W	ICS2	P38284	255 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	MET30	P39014	640 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	SOL4	P53315	255 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	VPS72	Q03388	795 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	GRS2	Q06817	618 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	CTI6	Q08923	506 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	SPE4	Q12455	300 aa		4.41	□□□□□ -1.7
EBP2	YKL172W	GCN4	P03069	281 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	OLE1	P21147	510 aa	Known RBP	4.4	□□□□□ -1.71
EBP2	YKL172W	YCR043C	P25361	127 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	CMK1	P27466	446 aa	Known RBP	4.4	□□□□□ -1.71
EBP2	YKL172W	SNC1	P31109	117 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	MIC60	P36112	540 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	NUP133	P36161	1157 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	EFM2	P38347	419 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	ARP1	P38696	384 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	TES1	P41903	349 aa	Known RBP	4.4	□□□□□ -1.71
EBP2	YKL172W	APT1	P49435	187 aa	Known RBP	4.4	□□□□□ -1.71
EBP2	YKL172W	PYK2	P52489	506 aa	Known RBP	4.4	□□□□□ -1.71
EBP2	YKL172W	YGR066C	P53242	292 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	NGL3	Q03210	505 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	YMR160W	Q03823	816 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	IMH1	Q06704	911 aa	Known RBP	4.4	□□□□□ -1.71
EBP2	YKL172W	RTT109	Q07794	436 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	YEH1	Q07804	573 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	APL5	Q08951	932 aa	Known RBP	4.4	□□□□□ -1.71
EBP2	YKL172W	TAH18	Q12181	623 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	ARP6	Q12509	438 aa		4.4	□□□□□ -1.71
EBP2	YKL172W	SNF3	P10870	884 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	MGR1	P25573	417 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	RPN2	P32565	945 aa	Known RBP	4.39	□□□□□ -1.71
EBP2	YKL172W	RAD24	P32641	659 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	YBR144C	P34215	104 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	RRP3	P38712	501 aa	Known RBP	4.39	□□□□□ -1.71
EBP2	YKL172W	SAD1	P43589	448 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	RPS10B	P46784	105 aa	Known RBP	4.39	□□□□□ -1.71
EBP2	YKL172W	PKP2	P53170	491 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	RSM23	Q01163	450 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	NUP100	Q02629	959 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	YDR415C	Q04033	374 aa	Predicted RBP	4.39	□□□□□ -1.71
EBP2	YKL172W	FMP42	Q04991	504 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	SSK1	Q07084	712 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	CDC45	Q08032	650 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	SDH5	Q08230	162 aa		4.39	□□□□□ -1.71
EBP2	YKL172W	SYN8	P31377	255 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	PHD1	P36093	366 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	ROT2	P38138	954 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	ERG7	P38604	731 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	LAG1	P38703	411 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	BZZ1	P38822	633 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	CCT6	P39079	546 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	CIN4	P39110	191 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	DSD1	P53095	428 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	RPS10A	Q08745	105 aa	Predicted RBP	4.38	□□□□□ -1.71
EBP2	YKL172W	YJR112W-A	Q3E743	109 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	YPT6	Q99260	215 aa		4.38	□□□□□ -1.71
EBP2	YKL172W	CBS1	P14066	229 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	PEP3	P27801	918 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	MCM4	P30665	933 aa	Known RBP	4.37	□□□□□ -1.71
EBP2	YKL172W	SEF1	P34228	1148 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	YKL023W	P36103	277 aa	Known RBP	4.37	□□□□□ -1.71
EBP2	YKL172W	RPL32	P38061	130 aa	Known RBP	4.37	□□□□□ -1.71
EBP2	YKL172W	REG2	P38232	338 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	ALG5	P40350	334 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	RMD8	P43620	662 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	MRX6	P48564	524 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	YGL082W	P53155	381 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	DIG1	Q03063	452 aa	Known RBP	4.37	□□□□□ -1.71
EBP2	YKL172W	MED1	Q12321	566 aa		4.37	□□□□□ -1.71
EBP2	YKL172W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.36	□□□□□ -1.71	not detected
EBP2	YKL172W	MRP7	P12687	371 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	HNM1	P19807	563 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	TYR1	P20049	452 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	KGD1	P20967	1014 aa	Known RBP	4.36	□□□□□ -1.71
EBP2	YKL172W	OCA4	P25366	362 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	YIR014W	P40570	242 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	FET5	P43561	622 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	ATG27	P46989	271 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	LCL3	P53153	274 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	CUL3	P53202	744 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	VPS75	P53853	264 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	FIN1	Q03898	291 aa		4.36	□□□□□ -1.71
EBP2	YKL172W	ART10	P18634	518 aa	Known RBP	4.35	□□□□□ -1.71
EBP2	YKL172W	RPN12	P32496	274 aa		4.35	□□□□□ -1.71
EBP2	YKL172W	MTR2	P34232	184 aa	Known RBP	4.35	□□□□□ -1.71
EBP2	YKL172W	YNK1	P36010	153 aa	Known RBP	4.35	□□□□□ -1.71
EBP2	YKL172W	UBP11	P36026	717 aa		4.35	□□□□□ -1.71
EBP2	YKL172W	SPC34	P36131	295 aa		4.35	□□□□□ -1.71
EBP2	YKL172W	YGR126W	P53274	230 aa		4.35	□□□□□ -1.71
EBP2	YKL172W	DUG3	P53871	357 aa		4.35	□□□□□ -1.71
EBP2	YKL172W	YVH1	Q02256	364 aa	Known RBP	4.35	□□□□□ -1.71
EBP2	YKL172W	SGS1	P35187	1447 aa		4.35	□□□□□ -1.71
EBP2	YKL172W	EST1	P17214	699 aa	Predicted RBP	4.34	□□□□□ -1.71
EBP2	YKL172W	TRS65	P32893	560 aa		4.34	□□□□□ -1.71
EBP2	YKL172W	YBR225W	P38321	900 aa		4.34	□□□□□ -1.71
EBP2	YKL172W	RTT107	P38850	1070 aa		4.34	□□□□□ -1.71

Retrieved 100 of 5,963 RNA–protein pairs in 125.9 ms