RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C PCA1P38360 1216 aa2.1□□□□□ -2.07
PCF11YDR228C SLZ1P40167 298 aa2.1□□□□□ -2.07
PCF11YDR228C SMK1P41808 388 aa2.1□□□□□ -2.07
PCF11YDR228C RHO4Q00246 291 aa2.1□□□□□ -2.07
PCF11YDR228C SSK1Q07084 712 aa2.1□□□□□ -2.07
PCF11YDR228C TRM8Q12009 286 aa2.1□□□□□ -2.07
PCF11YDR228C NUS1Q12063 375 aa2.1□□□□□ -2.07
PCF11YDR228C AMD1P15274 810 aaKnown RBP2.09□□□□□ -2.07
PCF11YDR228C SPE2P21182 396 aa2.09□□□□□ -2.07
PCF11YDR228C DBF20P32328 564 aa2.09□□□□□ -2.07
PCF11YDR228C PDB1P32473 366 aaKnown RBP2.09□□□□□ -2.07
PCF11YDR228C VPS17P32913 551 aa2.09□□□□□ -2.07
PCF11YDR228C SWH1P35845 1188 aa2.09□□□□□ -2.07
PCF11YDR228C LAG1P38703 411 aa2.09□□□□□ -2.07
PCF11YDR228C ELO1P39540 310 aa2.09□□□□□ -2.07
PCF11YDR228C IDP2P41939 412 aa2.09□□□□□ -2.07
PCF11YDR228C YGL242CP53066 181 aa2.09□□□□□ -2.07
PCF11YDR228C INN1P53901 409 aa2.09□□□□□ -2.07
PCF11YDR228C YVH1Q02256 364 aaKnown RBP2.09□□□□□ -2.07
PCF11YDR228C EMI2Q04409 500 aaKnown RBP2.09□□□□□ -2.07
PCF11YDR228C ETT1Q08421 412 aaKnown RBP2.09□□□□□ -2.07
PCF11YDR228C AYT1Q12226 474 aa2.09□□□□□ -2.07
PCF11YDR228C MTF1P14908 341 aaKnown RBP2.09□□□□□ -2.08
PCF11YDR228C SGV1P23293 657 aaKnown RBP2.09□□□□□ -2.08
PCF11YDR228C LDB16P25587 256 aa2.09□□□□□ -2.08
PCF11YDR228C FAA2P39518 744 aa2.09□□□□□ -2.08
PCF11YDR228C YEL068CP39977 110 aa2.09□□□□□ -2.08
PCF11YDR228C FMP10P40098 244 aa2.09□□□□□ -2.08
PCF11YDR228C RIC1P40395 1056 aa2.09□□□□□ -2.08
PCF11YDR228C CSM2P40465 213 aa2.09□□□□□ -2.08
PCF11YDR228C ERG26P53199 349 aaKnown RBP2.09□□□□□ -2.08
PCF11YDR228C ARG81P05085 880 aa2.08□□□□□ -2.08
PCF11YDR228C SNF1P06782 633 aaKnown RBP2.08□□□□□ -2.08
PCF11YDR228C PWP1P21304 576 aaKnown RBP2.08□□□□□ -2.08
PCF11YDR228C TEF4P36008 412 aaKnown RBP2.08□□□□□ -2.08
PCF11YDR228C MRPL4P36517 319 aa2.08□□□□□ -2.08
PCF11YDR228C MTC4P38335 694 aaKnown RBP2.08□□□□□ -2.08
PCF11YDR228C BNA5Q05979 453 aa2.08□□□□□ -2.08
PCF11YDR228C SKG3Q06315 1026 aa2.08□□□□□ -2.08
PCF11YDR228C YOL087CQ99247 1116 aa2.08□□□□□ -2.08
PCF11YDR228C HEM2P05373 342 aa2.07□□□□□ -2.08
PCF11YDR228C PMR1P13586 950 aa2.07□□□□□ -2.08
PCF11YDR228C SEC62P21825 274 aa2.07□□□□□ -2.08
PCF11YDR228C MRP20P32387 263 aa2.07□□□□□ -2.08
PCF11YDR228C SAC6P32599 642 aaKnown RBP2.07□□□□□ -2.08
PCF11YDR228C MTR2P34232 184 aaKnown RBP2.07□□□□□ -2.08
PCF11YDR228C ROT2P38138 954 aa2.07□□□□□ -2.08
PCF11YDR228C DBP8P38719 431 aa2.07□□□□□ -2.08
PCF11YDR228C YGL082WP53155 381 aa2.07□□□□□ -2.08
PCF11YDR228C ADD37Q03233 198 aa2.07□□□□□ -2.08
PCF11YDR228C YMR160WQ03823 816 aa2.07□□□□□ -2.08
PCF11YDR228C VID22Q05934 901 aa2.07□□□□□ -2.08
PCF11YDR228C YLR302CO13544 120 aa2.07□□□□□ -2.08
PCF11YDR228C CBF2P32504 956 aa2.07□□□□□ -2.08
PCF11YDR228C BUR6P40096 142 aa2.07□□□□□ -2.08
PCF11YDR228C AAD10P47182 288 aa2.07□□□□□ -2.08
PCF11YDR228C YPL014WQ02606 381 aa2.07□□□□□ -2.08
PCF11YDR228C SYO1Q07395 620 aa2.07□□□□□ -2.08
PCF11YDR228C BSC6Q08280 497 aa2.07□□□□□ -2.08
PCF11YDR228C LEU9Q12166 604 aaKnown RBP2.07□□□□□ -2.08
PCF11YDR228C BUD5P25300 642 aaPredicted RBP2.06□□□□□ -2.08
PCF11YDR228C YCR022CP25620 114 aa2.06□□□□□ -2.08
PCF11YDR228C SYN8P31377 255 aa2.06□□□□□ -2.08
PCF11YDR228C PTR2P32901 601 aa2.06□□□□□ -2.08
PCF11YDR228C YNK1P36010 153 aaKnown RBP2.06□□□□□ -2.08
PCF11YDR228C ALY1P36117 915 aa2.06□□□□□ -2.08
PCF11YDR228C YBP1P38315 674 aa2.06□□□□□ -2.08
PCF11YDR228C VPS52P39904 641 aa2.06□□□□□ -2.08
PCF11YDR228C RSM23Q01163 450 aa2.06□□□□□ -2.08
PCF11YDR228C GRC3Q07845 632 aa2.06□□□□□ -2.08
PCF11YDR228C RPL20AP0CX23 172 aaKnown RBP2.05□□□□□ -2.08
PCF11YDR228C RPL20BP0CX24 172 aaPredicted RBP2.05□□□□□ -2.08
PCF11YDR228C ATR1P13090 542 aa2.05□□□□□ -2.08
PCF11YDR228C PFK2P16862 959 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
PCF11YDR228C CNS1P33313 385 aa2.05□□□□□ -2.08
PCF11YDR228C OSH3P38713 996 aaKnown RBP2.05□□□□□ -2.08
PCF11YDR228C UME6P39001 836 aa2.05□□□□□ -2.08
PCF11YDR228C SIP4P46954 829 aa2.05□□□□□ -2.08
PCF11YDR228C MSC1Q03104 513 aa2.05□□□□□ -2.08
PCF11YDR228C PSR1Q07800 427 aa2.05□□□□□ -2.08
PCF11YDR228C YPL272CQ08984 517 aa2.05□□□□□ -2.08
PCF11YDR228C NCE102Q12207 173 aaRIP-Chip data2.05□□□□□ -2.08not detected
PCF11YDR228C YCL021W-AQ96VH3 125 aa2.05□□□□□ -2.08
PCF11YDR228C APE1P14904 514 aa2.05□□□□□ -2.08
PCF11YDR228C RNA14P25298 677 aaKnown RBP2.05□□□□□ -2.08
PCF11YDR228C ADH7P25377 361 aa2.05□□□□□ -2.08
PCF11YDR228C PMU1P36069 295 aa2.05□□□□□ -2.08
PCF11YDR228C PSY4P38193 441 aa2.05□□□□□ -2.08
PCF11YDR228C YER010CP40011 234 aa2.05□□□□□ -2.08
PCF11YDR228C RPS7BP48164 190 aaKnown RBP2.05□□□□□ -2.08
PCF11YDR228C DIA3P52290 468 aa2.05□□□□□ -2.08
PCF11YDR228C SMM1P53720 384 aaKnown RBP2.05□□□□□ -2.08
PCF11YDR228C YDL009CQ12210 107 aa2.05□□□□□ -2.08
PCF11YDR228C RER1P25560 188 aa2.04□□□□□ -2.08
PCF11YDR228C YKL100CP34248 587 aa2.04□□□□□ -2.08
PCF11YDR228C IES5P40060 125 aa2.04□□□□□ -2.08
PCF11YDR228C SAP185P40856 1058 aa2.04□□□□□ -2.08
PCF11YDR228C ALT2P52892 507 aa2.04□□□□□ -2.08
PCF11YDR228C DRN1P53255 507 aaKnown RBP2.04□□□□□ -2.08
PCF11YDR228C RBG2P53295 368 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms