RNA–Protein interactions for RNA: YCR018C

SRD1, Protein involved in the processing of pre-rRNA to mature rRNA, yeast

Gene SRD1, Length 666 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SRD1	YCR018C	LTP1	P40347	161 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	3.15	□□□□□ -1.91	not detected
SRD1	YCR018C	GAT1	P43574	510 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	YPT11	P48559	417 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	SGF73	P53165	657 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	YNL234W	P53857	426 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	RSM23	Q01163	450 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	VTC3	Q02725	835 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	ARP10	Q04549	284 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	ATG26	Q06321	1198 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	POS5	Q06892	414 aa		3.15	□□□□□ -1.91
SRD1	YCR018C	GAL4	P04386	881 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	MRP13	P12686	339 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	ART10	P18634	518 aa	Known RBP	3.14	□□□□□ -1.91
SRD1	YCR018C	SUI2	P20459	304 aa	Known RBP	3.14	□□□□□ -1.91
SRD1	YCR018C	ROX1	P25042	368 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	YME1	P32795	747 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	YBL055C	P34220	418 aa	Predicted RBP	3.14	□□□□□ -1.91
SRD1	YCR018C	YKL100C	P34248	587 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	RPL32	P38061	130 aa	Known RBP	3.14	□□□□□ -1.91
SRD1	YCR018C	VID24	P38263	362 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	TOM71	P38825	639 aa	Known RBP	3.14	□□□□□ -1.91
SRD1	YCR018C	YEL057C	P39983	233 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	ROK1	P45818	564 aa	Predicted RBP	3.14	□□□□□ -1.91
SRD1	YCR018C	IMD4	P50094	524 aa	Known RBP	3.14	□□□□□ -1.91
SRD1	YCR018C	BOP3	P53958	396 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	RDR1	Q08904	546 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	RTN2	Q12443	393 aa		3.14	□□□□□ -1.91
SRD1	YCR018C	GAC1	P28006	793 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	GPI10	P30777	616 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	TIF3	P34167	436 aa	Known RBP	3.13	□□□□□ -1.91
SRD1	YCR018C	NUP133	P36161	1157 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	ROT2	P38138	954 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	CIN4	P39110	191 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	MET28	P40573	187 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	NET1	P47035	1189 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	PET130	P47065	347 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	LYS20	P48570	428 aa	Known RBP	3.13	□□□□□ -1.91
SRD1	YCR018C	DUG3	P53871	357 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	EAF7	P53911	425 aa	Known RBP	3.13	□□□□□ -1.91
SRD1	YCR018C	STP1	Q00947	519 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	YVH1	Q02256	364 aa	Known RBP	3.13	□□□□□ -1.91
SRD1	YCR018C	CTL1	Q03220	320 aa	Known RBP	3.13	□□□□□ -1.91
SRD1	YCR018C	FIN1	Q03898	291 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	YDL218W	Q07629	317 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	ATG29	Q12092	213 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	YLR112W	Q12130	139 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	RLM1	Q12224	676 aa		3.13	□□□□□ -1.91
SRD1	YCR018C	EDE1	P34216	1381 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	YML133C	Q03099	1374 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	YLL067C	Q07888	1374 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	YLL066C	Q99208	1374 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	YPR089W	O13585	888 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	CBP1	P07252	654 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	PUT2	P07275	575 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	SNF3	P10870	884 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	BUD5	P25300	642 aa	Predicted RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	SYN8	P31377	255 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	NPL6	P32832	435 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	BYE1	P36106	594 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	MSR1	P38714	643 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	OTU2	P38747	307 aa	Known RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	YMR124W	P39523	943 aa	Known RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	MET18	P40469	1032 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	YIL060W	P40519	144 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	BNA3	P47039	444 aa	Known RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	APT1	P49435	187 aa	Known RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	HOS2	P53096	452 aa	Predicted RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	TWF1	P53250	332 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	YGR126W	P53274	230 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	GIR2	Q03768	265 aa	Predicted RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	YMR155W	Q03795	547 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	CAC2	Q04199	468 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	MRPL1	Q04599	285 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	YDL057W	Q07379	328 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	RPS10A	Q08745	105 aa	Predicted RBP	3.12	□□□□□ -1.91
SRD1	YCR018C	ATX2	Q12067	313 aa		3.12	□□□□□ -1.91
SRD1	YCR018C	CLB3	P24870	427 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	PAP1	P29468	568 aa	Known RBP	3.11	□□□□□ -1.91
SRD1	YCR018C	MRE11	P32829	692 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	WBP1	P33767	430 aa	Known RBP	3.11	□□□□□ -1.91
SRD1	YCR018C	CMC1	P36064	111 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	SMF1	P38925	575 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	YIR016W	P40572	265 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	GPD2	P41911	440 aa	Known RBP	3.11	□□□□□ -1.91
SRD1	YCR018C	RPS10B	P46784	105 aa	Known RBP	3.11	□□□□□ -1.91
SRD1	YCR018C	YMR160W	Q03823	816 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	ECI1	Q05871	280 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	ADE13	Q05911	482 aa	Known RBP	3.11	□□□□□ -1.91
SRD1	YCR018C	RTT109	Q07794	436 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	GSH2	Q08220	491 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
SRD1	YCR018C	GRX6	Q12438	231 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	ERP4	Q12450	207 aa		3.11	□□□□□ -1.91
SRD1	YCR018C	DBF4	P32325	704 aa		3.1	□□□□□ -1.91
SRD1	YCR018C	ERG3	P32353	365 aa		3.1	□□□□□ -1.91
SRD1	YCR018C	NFU1	P32860	256 aa		3.1	□□□□□ -1.91
SRD1	YCR018C	PMT1	P33775	817 aa		3.1	□□□□□ -1.91
SRD1	YCR018C	UBA4	P38820	440 aa		3.1	□□□□□ -1.91
SRD1	YCR018C	HXT9	P40885	567 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 14 ms