RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 POTEB2H3BUK9 544 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 SRGAP2O75044 1071 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 HIBADHP31937 336 aaKnown RBP15.53■□□□□ 0.08
PHGDH-233ENST00000642021 KIF5BP33176 963 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 KLK7P49862 253 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 PIP4K2BP78356 416 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 SBK1Q52WX2 424 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 USP17L1Q7RTZ2 530 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 DNAJC7Q99615 494 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 VPS18Q9P253 973 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 ARPP21Q9UBL0 812 aaPredicted RBP15.53■□□□□ 0.08
PHGDH-233ENST00000642021 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 LMAN1P49257 510 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 RASSF8Q8NHQ8 419 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 MAD2L2Q9UI95 211 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 KCNG1Q9UIX4 513 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 RCCD1A6NED2 376 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 B4DLN1 442 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 ATP1A1P05023 1023 aaKnown RBP15.53■□□□□ 0.08
PHGDH-233ENST00000642021 CAPN2P17655 700 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 RPS8P62241 208 aaKnown RBP15.53■□□□□ 0.08
PHGDH-233ENST00000642021 CASP8Q14790 479 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 TTI2Q6NXR4 508 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 CLEC4GQ6UXB4 293 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 TRAPPC11Q7Z392 1133 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 EXOC4Q96A65 974 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 DUSP9Q99956 384 aaKnown RBP15.53■□□□□ 0.08
PHGDH-233ENST00000642021 KBTBD4Q9NVX7 518 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 CAPN11Q9UMQ6 739 aa15.53■□□□□ 0.08
PHGDH-233ENST00000642021 DLEC1Q9Y238 1755 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 CCDC194A0A1B0GVG4 234 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 LRRIQ3A6PVS8 624 aaPredicted RBP15.52■□□□□ 0.08
PHGDH-233ENST00000642021 TULP2O00295 520 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 ERLIN1O75477 346 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 GPS2Q13227 327 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 TBC1D9BQ66K14 1250 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 GIMAP8Q8ND71 665 aaPredicted RBP15.52■□□□□ 0.08
PHGDH-233ENST00000642021 CNKSR2Q8WXI2 1034 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 TRIM47Q96LD4 638 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 CPVLQ9H3G5 476 aa15.52■□□□□ 0.08
PHGDH-233ENST00000642021 RHOBTB3O94955 611 aa15.52■□□□□ 0.07
PHGDH-233ENST00000642021 UBA7P41226 1012 aa15.52■□□□□ 0.07
PHGDH-233ENST00000642021 IRX3P78415 501 aaPredicted RBP15.52■□□□□ 0.07
PHGDH-233ENST00000642021 KCNB1Q14721 858 aa15.52■□□□□ 0.07
PHGDH-233ENST00000642021 ZSCAN26Q16670 478 aa15.52■□□□□ 0.07
PHGDH-233ENST00000642021 MMS19Q96T76 1030 aa15.52■□□□□ 0.07
PHGDH-233ENST00000642021 LACRTQ9GZZ8 138 aa15.52■□□□□ 0.07
PHGDH-233ENST00000642021 MKRN1Q9UHC7 482 aaKnown RBP15.52■□□□□ 0.07
PHGDH-233ENST00000642021 A0A1B0GUL6 1792 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 PDS5AQ29RF7 1337 aaKnown RBP15.51■□□□□ 0.07
PHGDH-233ENST00000642021 A0A1W2PQC6 194 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 PSMD14O00487 310 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 EEF1GP26641 437 aaKnown RBP15.51■□□□□ 0.07
PHGDH-233ENST00000642021 CCDC122Q5T0U0 273 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 DGKHQ86XP1 1220 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 SLC44A5Q8NCS7 719 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 LINC00116Q8NCU8 138 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 HAUS4Q9H6D7 363 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 SH3GLB2Q9NR46 395 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 FAN1Q9Y2M0 1017 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 DUSP10Q9Y6W6 482 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 GOLGA8HP0CJ92 632 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 C12orf60Q5U649 245 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 HEATR3Q7Z4Q2 680 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 TTYH3Q9C0H2 523 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 THAP9Q9H5L6 903 aa15.51■□□□□ 0.07
PHGDH-233ENST00000642021 PHACTR2O75167 634 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 TUBB4BP68371 445 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 RAD51AP2Q09MP3 1159 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 STK4Q13043 487 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 TUBGCP2Q9BSJ2 902 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 CCSER1Q9C0I3 900 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 PSD3Q9NYI0 1048 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 SRGNP10124 158 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 GRM4Q14833 912 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 MUM1L1Q5H9M0 696 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 ANKRD40Q6AI12 368 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 CSGALNACT2Q8N6G5 542 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 SPATA31A1Q5TZJ5 1347 aa15.5■□□□□ 0.07
PHGDH-233ENST00000642021 SCN7AQ01118 1682 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 STXBP3O00186 592 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 PSMA7O14818 248 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 FCER1AP12319 257 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 PLCG1P19174 1290 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 GRIK5Q16478 980 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 MEA1Q16626 185 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 TXNRD1Q16881 649 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 SLC10A5Q5PT55 438 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 HPS3Q969F9 1004 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 CAPZA3Q96KX2 299 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 COL14A1Q05707 1796 aaKnown RBP15.49■□□□□ 0.07
PHGDH-233ENST00000642021 WDR93Q6P2C0 686 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 MSL3Q8N5Y2 521 aaKnown RBP15.49■□□□□ 0.07
PHGDH-233ENST00000642021 SH3RF3Q8TEJ3 882 aaPredicted RBP15.49■□□□□ 0.07
PHGDH-233ENST00000642021 SAR1BQ9Y6B6 198 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 FLT1P17948 1338 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 LAMB2P55268 1798 aa15.49■□□□□ 0.07
PHGDH-233ENST00000642021 DNM2P50570 870 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 USP14P54578 494 aa15.48■□□□□ 0.07
PHGDH-233ENST00000642021 CYP27A1Q02318 531 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms