RNA–Protein interactions for RNA: ENST00000641899.1

SRRM4-204, Transcript of serine/arginine repetitive matrix 4, humanhuman

Gene SRRM4, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-204ENST00000641899 FEM1BQ9UK73 627 aa18.02■□□□□ 0.48
SRRM4-204ENST00000641899 SYNPO2Q9UMS6 1093 aa18.02■□□□□ 0.48
SRRM4-204ENST00000641899 GTPBP6O43824 516 aaPredicted RBP18.01■□□□□ 0.47
SRRM4-204ENST00000641899 RAB11FIP3O75154 756 aa18.01■□□□□ 0.47
SRRM4-204ENST00000641899 TNFAIP2Q03169 654 aa18.01■□□□□ 0.47
SRRM4-204ENST00000641899 SKIV2LQ15477 1246 aaKnown RBP18.01■□□□□ 0.47
SRRM4-204ENST00000641899 PPP2R2DQ66LE6 453 aa18.01■□□□□ 0.47
SRRM4-204ENST00000641899 ARMCX2Q7L311 632 aa18.01■□□□□ 0.47
SRRM4-204ENST00000641899 KIFC2Q96AC6 838 aa18.01■□□□□ 0.47
SRRM4-204ENST00000641899 SLC4A7Q9Y6M7 1214 aa18.01■□□□□ 0.47
SRRM4-204ENST00000641899 MYO5AQ9Y4I1 1855 aaKnown RBP18.01■□□□□ 0.47
SRRM4-204ENST00000641899 CYP2D7A0A087X1C5 515 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 ASB14A6NK59 587 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 NDUFB10O96000 172 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 CD4P01730 458 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 PFKMP08237 780 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 CYP2C18P33260 490 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 NKX3-2P78367 333 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 CTR9Q6PD62 1173 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 RPAP2Q8IXW5 612 aaPredicted RBP18■□□□□ 0.47
SRRM4-204ENST00000641899 BCL11AQ9H165 835 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 BOLA2Q9H3K6 86 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 RIPK3Q9Y572 518 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 MUC3AQ02505 3323 aa18■□□□□ 0.47
SRRM4-204ENST00000641899 ATP5JP18859 108 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 ADGRE1Q14246 886 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 GIMAP6Q6P9H5 292 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 OTOP2Q7RTS6 562 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 ZNF444Q8N0Y2 327 aaPredicted RBP17.99■□□□□ 0.47
SRRM4-204ENST00000641899 MICALL1Q8N3F8 863 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 NUP88Q99567 741 aaPredicted RBP17.99■□□□□ 0.47
SRRM4-204ENST00000641899 SLC38A10Q9HBR0 1119 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 RAVER2Q9HCJ3 691 aaKnown RBP17.99■□□□□ 0.47
SRRM4-204ENST00000641899 CLIP2Q9UDT6 1046 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 HCN4Q9Y3Q4 1203 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 PCDHA11Q9Y5I1 949 aa17.99■□□□□ 0.47
SRRM4-204ENST00000641899 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 ZBBXA8MT70 800 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 SUPT20HL2P0C7V6 817 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 ITGA7Q13683 1181 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 FSCN1Q16658 493 aaKnown RBP17.98■□□□□ 0.47
SRRM4-204ENST00000641899 SBK1Q52WX2 424 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 CCDC144CPQ8IYA2 1237 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 HAUS7Q99871 368 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 CHMP4BQ9H444 224 aaKnown RBP17.98■□□□□ 0.47
SRRM4-204ENST00000641899 ACAD9Q9H845 621 aa17.98■□□□□ 0.47
SRRM4-204ENST00000641899 ISY1Q9ULR0 285 aaKnown RBP17.98■□□□□ 0.47
SRRM4-204ENST00000641899 ARIH1Q9Y4X5 557 aaPredicted RBP17.98■□□□□ 0.47
SRRM4-204ENST00000641899 ACTN1P12814 892 aa17.97■□□□□ 0.47
SRRM4-204ENST00000641899 PPP4R3BQ5MIZ7 849 aa17.97■□□□□ 0.47
SRRM4-204ENST00000641899 CXCL17Q6UXB2 119 aa17.97■□□□□ 0.47
SRRM4-204ENST00000641899 TLK2Q86UE8 772 aa17.97■□□□□ 0.47
SRRM4-204ENST00000641899 SLC43A3Q8NBI5 491 aa17.97■□□□□ 0.47
SRRM4-204ENST00000641899 COG6Q9Y2V7 657 aa17.97■□□□□ 0.47
SRRM4-204ENST00000641899 Q9Y3F1 56 aa17.97■□□□□ 0.47
SRRM4-204ENST00000641899 RLBP1P12271 317 aa17.96■□□□□ 0.47
SRRM4-204ENST00000641899 ATP2A2P16615 1042 aaKnown RBP17.96■□□□□ 0.47
SRRM4-204ENST00000641899 TKFCQ3LXA3 575 aa17.96■□□□□ 0.47
SRRM4-204ENST00000641899 CHURC1Q8WUH1 139 aa17.96■□□□□ 0.47
SRRM4-204ENST00000641899 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.96■□□□□ 0.47
SRRM4-204ENST00000641899 COG5Q9UP83 839 aa17.96■□□□□ 0.47
SRRM4-204ENST00000641899 MINDY4BA8MYZ0 360 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 ERC2O15083 957 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 TTLL1O95922 423 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 RASA1P20936 1047 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 CCL23P55773 120 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 BEX3Q00994 111 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 IKQ13123 557 aaPredicted RBP17.95■□□□□ 0.46
SRRM4-204ENST00000641899 TMEM67Q5HYA8 995 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 IQSEC1Q6DN90 963 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 FAM160B2Q86V87 743 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 GMCL1P1Q8NEA9 526 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 MKL1Q969V6 931 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
SRRM4-204ENST00000641899 YBX2Q9Y2T7 364 aaKnown RBP17.95■□□□□ 0.46
SRRM4-204ENST00000641899 SMCHD1A6NHR9 2005 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 KIF28PB7ZC32 967 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 DYNC1LI2O43237 492 aaPredicted RBP17.94■□□□□ 0.46
SRRM4-204ENST00000641899 ADCY6O43306 1168 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 SLC3A2P08195 630 aaKnown RBP17.94■□□□□ 0.46
SRRM4-204ENST00000641899 BMP3P12645 472 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 BMP1P13497 986 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 GNAT2P19087 354 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 STAT2P52630 851 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 LRRFIP1Q32MZ4 808 aaKnown RBP17.94■□□□□ 0.46
SRRM4-204ENST00000641899 NOC4LQ9BVI4 516 aaKnown RBP17.94■□□□□ 0.46
SRRM4-204ENST00000641899 RAPGEFL1Q9UHV5 662 aa17.94■□□□□ 0.46
SRRM4-204ENST00000641899 TDO2P48775 406 aa17.93■□□□□ 0.46
SRRM4-204ENST00000641899 IRX5P78411 483 aaPredicted RBP17.93■□□□□ 0.46
SRRM4-204ENST00000641899 BRDTQ58F21 947 aaPredicted RBP17.93■□□□□ 0.46
SRRM4-204ENST00000641899 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
SRRM4-204ENST00000641899 PUS7LQ9H0K6 701 aaKnown RBP17.93■□□□□ 0.46
SRRM4-204ENST00000641899 GPHNQ9NQX3 736 aaPredicted RBP17.93■□□□□ 0.46
SRRM4-204ENST00000641899 MTMR4Q9NYA4 1195 aa17.93■□□□□ 0.46
SRRM4-204ENST00000641899 GNEQ9Y223 722 aaKnown RBP17.93■□□□□ 0.46
SRRM4-204ENST00000641899 SMIM22K7EJ46 135 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 CTAGE5O15320 804 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 B4GALT4O60513 344 aa17.92■□□□□ 0.46
SRRM4-204ENST00000641899 POU3F3P20264 500 aaPredicted RBP17.92■□□□□ 0.46
SRRM4-204ENST00000641899 RFC2P35250 354 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms