RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 CCL14Q16627 93 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 ABCB5Q2M3G0 1257 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 SHROOM1Q2M3G4 852 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-228ENST00000641847 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 MORN1Q5T089 497 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 WDR78Q5VTH9 848 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 HSCBQ8IWL3 235 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 NEDD1Q8NHV4 660 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 PPM1EQ8WY54 764 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 USP6NLQ92738 828 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 CCDC17Q96LX7 622 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 MTA3Q9BTC8 594 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 PAGR1Q9BTK6 254 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 GPHNQ9NQX3 736 aaPredicted RBP10.99□□□□□ -0.65
PHGDH-228ENST00000641847 IVNS1ABPQ9Y6Y0 642 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 PIEZO1Q92508 2521 aa10.99□□□□□ -0.65
PHGDH-228ENST00000641847 IGKV6D-41A0A0C4DH26 115 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-228ENST00000641847 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-228ENST00000641847 GH2P01242 217 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 MYCNP04198 464 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-228ENST00000641847 ASNSP08243 561 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 WTAPQ15007 396 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 SLC39A5Q6ZMH5 540 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 TMEM179Q6ZVK1 233 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 FBXL16Q8N461 479 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 ENAHQ8N8S7 591 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-228ENST00000641847 USP38Q8NB14 1042 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 BRF1Q92994 677 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 SNX21Q969T3 373 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 WDR18Q9BV38 432 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.98□□□□□ -0.65
PHGDH-228ENST00000641847 AGXT2Q9BYV1 514 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 ALDH8A1Q9H2A2 487 aaPredicted RBP10.98□□□□□ -0.65
PHGDH-228ENST00000641847 ZNF576Q9H609 170 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 LY9Q9HBG7 655 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 ZBTB21Q9ULJ3 1066 aa10.98□□□□□ -0.65
PHGDH-228ENST00000641847 DNAJB2P25686 324 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 MCM2P49736 904 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 JAG1P78504 1218 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 APOBRQ0VD83 1088 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 SEC23AQ15436 765 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 CCDC178Q5BJE1 867 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 GJC2Q5T442 439 aaPredicted RBP10.97□□□□□ -0.65
PHGDH-228ENST00000641847 IFIT1BQ5T764 474 aaKnown RBP10.97□□□□□ -0.65
PHGDH-228ENST00000641847 CCDC174Q6PII3 467 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 CLEC10AQ8IUN9 316 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 IGDCC4Q8TDY8 1250 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 TIFAQ96CG3 184 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 CEP95Q96GE4 821 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 LARP6Q9BRS8 491 aaKnown RBP10.97□□□□□ -0.65
PHGDH-228ENST00000641847 PORCNQ9H237 461 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 SENP2Q9HC62 589 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 TXNRD2Q9NNW7 524 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 CABP5Q9NP86 173 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 IL17RBQ9NRM6 502 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 TCP11L1Q9NUJ3 509 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 RBPJLQ9UBG7 517 aa10.97□□□□□ -0.65
PHGDH-228ENST00000641847 MYH4Q9Y623 1939 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 KLF18A0A0U1RQI7 1052 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 CCDC69A6NI79 296 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 SLC15A5A6NIM6 579 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 USP17L10C9JJH3 530 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 K7ELQ4 463 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-228ENST00000641847 RAG1P15918 1043 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 GUCY1A2P33402 732 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 LIFRP42702 1097 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 ICA1Q05084 483 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 BECN1Q14457 450 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 SEPT2Q15019 361 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 TRIM60Q495X7 471 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 NFXL1Q6ZNB6 911 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 PDLIM7Q9NR12 457 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 GINM1Q9NU53 330 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 TPCN1Q9ULQ1 816 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.65
PHGDH-228ENST00000641847 STX8Q9UNK0 236 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 RABGAP1Q9Y3P9 1069 aa10.96□□□□□ -0.65
PHGDH-228ENST00000641847 SYNGAP1Q96PV0 1343 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 LARGE1O95461 756 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 TTLL1O95922 423 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 TOP1P11387 765 aaKnown RBP10.95□□□□□ -0.66
PHGDH-228ENST00000641847 FPGSQ05932 587 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 AAK1Q2M2I8 961 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 Q3C1V9 767 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 RCSD1Q6JBY9 416 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 SGMS1Q86VZ5 419 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 MICU3Q86XE3 530 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 DGKHQ86XP1 1220 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 RAB11FIP4Q86YS3 637 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 ZNF654Q8IZM8 581 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 LRRC47Q8N1G4 583 aaKnown RBP10.95□□□□□ -0.66
PHGDH-228ENST00000641847 ANKS1AQ92625 1134 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 KAT14Q9H8E8 782 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 KANSL2Q9H9L4 492 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 MTMR4Q9NYA4 1195 aa10.95□□□□□ -0.66
PHGDH-228ENST00000641847 BRPF3Q9ULD4 1205 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms