RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 EFCAB13Q8IY85 973 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 MSL3Q8N5Y2 521 aaKnown RBP6.76□□□□□ -1.33
CASC19-260ENST00000641828 TSPYL6Q8N831 410 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 JMYQ8N9B5 988 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 PPP1R13BQ96KQ4 1090 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 RHOVQ96L33 236 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 SH2B1Q9NRF2 756 aaPredicted RBP6.76□□□□□ -1.33
CASC19-260ENST00000641828 KCNG1Q9UIX4 513 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 CTAGE5O15320 804 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 TADA3O75528 432 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 FAM157BP0CG42 384 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 PDCP20941 246 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 TRDNQ13061 729 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 LRRFIP1Q32MZ4 808 aaKnown RBP6.76□□□□□ -1.33
CASC19-260ENST00000641828 EGFLAMQ63HQ2 1017 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 E4F1Q66K89 784 aaPredicted RBP6.76□□□□□ -1.33
CASC19-260ENST00000641828 FBXL19Q6PCT2 694 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 TPTE2Q6XPS3 522 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 JAZF1Q86VZ6 243 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 NCAPG2Q86XI2 1143 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 CCDC150Q8NCX0 1101 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 ZKSCAN3Q9BRR0 538 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 ZFATQ9P243 1243 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 DNAI1Q9UI46 699 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 TTC41PQ6P2S7 1318 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 TTC21AQ8NDW8 1320 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 SALL3Q9BXA9 1300 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 KIAA0232Q92628 1395 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 ROBO2Q9HCK4 1378 aa6.76□□□□□ -1.33
CASC19-260ENST00000641828 CDC42BPGQ6DT37 1551 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 BECN2A8MW95 431 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 EFSO43281 561 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 SEC31AO94979 1220 aaKnown RBP6.75□□□□□ -1.33
CASC19-260ENST00000641828 BMP1P13497 986 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 MAP2K2P36507 400 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 SERINC3Q13530 473 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 RUFY3Q7L099 469 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 CCNJLQ8IV13 435 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 ANKRD20A12PQ8NF67 263 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 CNTNAP3BQ96NU0 1288 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 TACO1Q9BSH4 297 aaKnown RBP6.75□□□□□ -1.33
CASC19-260ENST00000641828 NT5C1AQ9BXI3 368 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 FUT8Q9BYC5 575 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 CNTNAP3Q9BZ76 1288 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 FAM107BQ9H098 131 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 KCNQ5Q9NR82 932 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 STRIP2Q9ULQ0 834 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 SUFUQ9UMX1 484 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.75□□□□□ -1.33
CASC19-260ENST00000641828 USP16Q9Y5T5 823 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 YTHDC2Q9H6S0 1430 aaKnown RBP6.75□□□□□ -1.33
CASC19-260ENST00000641828 NRXN1Q9ULB1 1477 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 DLG5Q8TDM6 1919 aa6.75□□□□□ -1.33
CASC19-260ENST00000641828 MAP2K7O14733 419 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ARHGEF10O15013 1369 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 PLSCR1O15162 318 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ATXN7O15265 892 aaPredicted RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 KIF4AO95239 1232 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 SMC2O95347 1197 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 USP8P40818 1118 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 SOX9P48436 509 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 LIG3P49916 1009 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 FAM160A1Q05DH4 1040 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 LBRQ14739 615 aaKnown RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 SART3Q15020 963 aaKnown RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 STX1AQ16623 288 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 SPATA31A1Q5TZJ5 1347 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 FIGNL1Q6PIW4 674 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 HOMER1Q86YM7 354 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 LRRN4CLQ8ND94 238 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 PHC3Q8NDX5 983 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 RILPL2Q969X0 211 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 PNMA5Q96PV4 448 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 OSMRQ99650 979 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ZSCAN16Q9H4T2 348 aaPredicted RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 MBIPQ9NS73 344 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 PLA2G2EQ9NZK7 142 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 STAP2Q9UGK3 403 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 TLR6Q9Y2C9 796 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 TNS2Q63HR2 1409 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 AOX1Q06278 1338 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ADGRF5Q8IZF2 1346 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 A0A087WUV0 522 aaPredicted RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 DCDC2BA2VCK2 349 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 VPS37CA5D8V6 355 aaPredicted RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 CCDC151A5D8V7 595 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ELL2O00472 640 aaPredicted RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 PSAPP07602 524 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 CELA3AP09093 270 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ACPPP15309 386 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 SOX18P35713 384 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 ETFBP38117 255 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 TDO2P48775 406 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 EVCP57679 992 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 COL9A2Q14055 689 aaPredicted RBP6.74□□□□□ -1.33
CASC19-260ENST00000641828 BRD3Q15059 726 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 SLC15A2Q16348 729 aa6.74□□□□□ -1.33
CASC19-260ENST00000641828 VPS53Q5VIR6 699 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms