RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	NUCB1	Q02818	461 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	ACVR2B	Q13705	512 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	CCDC144B	Q3MJ40	725 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	TJAP1	Q5JTD0	557 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	MFSD5	Q6N075	450 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	MAMDC4	Q6UXC1	1216 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	CCDC129	Q6ZRS4	1044 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	CHD1L	Q86WJ1	897 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	KIFC2	Q96AC6	838 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	DDRGK1	Q96HY6	314 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	GLT1D1	Q96MS3	346 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	PRDM12	Q9H4Q4	367 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	ARPP21	Q9UBL0	812 aa	Predicted RBP	11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	RAPGEFL1	Q9UHV5	662 aa		11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	DDX49	Q9Y6V7	483 aa	Known RBP	11.95	□□□□□ -0.5
PHGDH-222	ENST00000641587	LRRC37A2	A6NM11	1700 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	UMODL1	Q5DID0	1318 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	GSG1L2	A8MUP6	293 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	MINDY4B	A8MYZ0	360 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	CTAGE5	O15320	804 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	PRDM1	O75626	825 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	CST5	P28325	142 aa	Predicted RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	CYP2C18	P33260	490 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	BEX3	Q00994	111 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	TSHZ3	Q63HK5	1081 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	ZNF365	Q70YC5	407 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	ARMCX2	Q7L311	632 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	SKAP1	Q86WV1	359 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	FAM126B	Q8IXS8	530 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	LRRC47	Q8N1G4	583 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	MSL3	Q8N5Y2	521 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	SYMPK	Q92797	1274 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	VTI1A	Q96AJ9	217 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	CHMP4C	Q96CF2	233 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	STRBP	Q96SI9	672 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	KATNBL1	Q9H079	304 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	UPF3A	Q9H1J1	476 aa	Known RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	HOMER2	Q9NSB8	354 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	NYAP2	Q9P242	653 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	CLIP2	Q9UDT6	1046 aa		11.94	□□□□□ -0.5
PHGDH-222	ENST00000641587	ASTN1	O14525	1302 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	ELP1	O95163	1332 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	IGKV6D-41	A0A0C4DH26	115 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587		A0A0U1RQG5	324 aa	Predicted RBP	11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	ARVCF	O00192	962 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	GJA9	P57773	515 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	CNTN2	Q02246	1040 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	PPIG	Q13427	754 aa	Known RBP eCLIP	11.93	□□□□□ -0.5	6e-8	■□□□□ 10.1
PHGDH-222	ENST00000641587	ADGRE1	Q14246	886 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	RASIP1	Q5U651	963 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	ZNF467	Q7Z7K2	595 aa	Predicted RBP	11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	CCDC144CP	Q8IYA2	1237 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	ANKRD35	Q8N283	1001 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	PRPF38A	Q8NAV1	312 aa	Known RBP	11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	OSBP2	Q969R2	916 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	CEP95	Q96GE4	821 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	MKNK2	Q9HBH9	465 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	SLC38A10	Q9HBR0	1119 aa		11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.93	□□□□□ -0.5
PHGDH-222	ENST00000641587	MROH7	Q68CQ1	1323 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	LCT	P09848	1927 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	TNFRSF10A	O00220	468 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	ATP2A1	O14983	1001 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	ZBED4	O75132	1171 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	CCDC85B	Q15834	202 aa	Predicted RBP	11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	SBK1	Q52WX2	424 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	GNAS	Q5JWF2	1037 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	GAS2L1	Q99501	681 aa	Predicted RBP	11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	NKX2-4	Q9H2Z4	354 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	ABHD16B	Q9H3Z7	469 aa		11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	YBX2	Q9Y2T7	364 aa	Known RBP	11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.92	□□□□□ -0.5
PHGDH-222	ENST00000641587		M0R2C6	588 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	CD4	P01730	458 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	COL9A1	P20849	921 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	TMEM63B	Q5T3F8	832 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	ZSCAN25	Q6NSZ9	544 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	CXCL17	Q6UXB2	119 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	RASGRP2	Q7LDG7	609 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	TMEM199	Q8N511	208 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	PCSK9	Q8NBP7	692 aa	Known RBP	11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	SPC25	Q9HBM1	224 aa		11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	ISY1	Q9ULR0	285 aa	Known RBP	11.91	□□□□□ -0.5
PHGDH-222	ENST00000641587	GRIN2D	O15399	1336 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	SOWAHB	A6NEL2	793 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	TLR3	O15455	904 aa	Known RBP	11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	GPAA1	O43292	621 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	IGFBP4	P22692	258 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	PDE4A	P27815	886 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	TDO2	P48775	406 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	CCL23	P55773	120 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	SNAP25	P60880	206 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	NOL8	Q76FK4	1167 aa	Known RBP	11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	OTOP2	Q7RTS6	562 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	TLK2	Q86UE8	772 aa		11.9	□□□□□ -0.5
PHGDH-222	ENST00000641587	FAM133A	Q8N9E0	248 aa		11.9	□□□□□ -0.5

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