RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-238ENST00000641523 PRKAG3Q9UGI9 489 aa8.13□□□□□ -1.11
CASC19-238ENST00000641523 PCDHA4Q9UN74 947 aa8.13□□□□□ -1.11
CASC19-238ENST00000641523 SHISA8B8ZZ34 492 aa8.12□□□□□ -1.11
CASC19-238ENST00000641523 TEFQ10587 303 aa8.12□□□□□ -1.11
CASC19-238ENST00000641523 SERINC3Q13530 473 aa8.12□□□□□ -1.11
CASC19-238ENST00000641523 MTHFSDQ2M296 383 aaKnown RBP8.12□□□□□ -1.11
CASC19-238ENST00000641523 SCARA3Q6AZY7 606 aa8.12□□□□□ -1.11
CASC19-238ENST00000641523 DMRTC2Q8IXT2 367 aaPredicted RBP8.12□□□□□ -1.11
CASC19-238ENST00000641523 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
CASC19-238ENST00000641523 CRBNQ96SW2 442 aa8.12□□□□□ -1.11
CASC19-238ENST00000641523 PCDHB14Q9Y5E9 798 aa8.12□□□□□ -1.11
CASC19-238ENST00000641523 CICQ96RK0 1608 aaPredicted RBP8.12□□□□□ -1.11
CASC19-238ENST00000641523 COL3A1P02461 1466 aaPredicted RBP8.12□□□□□ -1.11
CASC19-238ENST00000641523 SCN11AQ9UI33 1791 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 GNAT3A8MTJ3 354 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 OIP5O43482 229 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 MARCH6O60337 910 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 GYS1P13807 737 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 GIPRP48546 466 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 NLRP12P59046 1061 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 TGFB2P61812 414 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 INPP5AQ14642 412 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 GALNT11Q8NCW6 608 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 IRF7Q92985 503 aa8.11□□□□□ -1.11
CASC19-238ENST00000641523 K7ELQ4 463 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 DDX3YO15523 660 aaKnown RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 ZNF862O60290 1169 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 STARD3NLO95772 234 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 NEFMP07197 916 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 YBX3P16989 372 aaKnown RBP eCLIP8.1□□□□□ -1.11
CASC19-238ENST00000641523 LIG1P18858 919 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 AMPD1P23109 780 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 SETDB1Q15047 1291 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 WDR89Q96FK6 387 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 TEX13AQ9BXU3 409 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 USP26Q9BXU7 913 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 TRIM55Q9BYV6 548 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 ZNRF3Q9ULT6 936 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 R3HCC1Q9Y3T6 440 aaKnown RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 COL5A3P25940 1745 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 USP42Q9H9J4 1324 aaKnown RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 C10orf71Q711Q0 1435 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 TLDC2A0PJX2 215 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 TM4SF5O14894 197 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 BCRP11274 1271 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 CNGB1Q14028 1251 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 COL9A3Q14050 684 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 RAB33AQ14088 237 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 PDE3AQ14432 1141 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 TAF7LQ5H9L4 462 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 WIPI1Q5MNZ9 446 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 TMED8Q6PL24 325 aaPredicted RBP8.1□□□□□ -1.11
CASC19-238ENST00000641523 PLPPR2Q96GM1 343 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
CASC19-238ENST00000641523 ADAMTS7Q9UKP4 1686 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 A0A087WZG4 1122 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 GFRA2O00451 464 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 U2AF1L5P0DN76 240 aaPredicted RBP8.09□□□□□ -1.11
CASC19-238ENST00000641523 CYP19A1P11511 503 aaPredicted RBP8.09□□□□□ -1.11
CASC19-238ENST00000641523 PRKAR2BP31323 418 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 U2AF1Q01081 240 aaKnown RBP eCLIP8.09□□□□□ -1.111e-15■■■□□ 14.9
CASC19-238ENST00000641523 SUZ12Q15022 739 aaKnown RBP8.09□□□□□ -1.11
CASC19-238ENST00000641523 LRFN4Q6PJG9 635 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 LYPD4Q6UWN0 246 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 SMIM5Q71RC9 77 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 DNAJC10Q8IXB1 793 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 ZNF526Q8TF50 670 aaPredicted RBP8.09□□□□□ -1.11
CASC19-238ENST00000641523 RTF1Q92541 710 aaKnown RBP8.09□□□□□ -1.11
CASC19-238ENST00000641523 EHMT1Q9H9B1 1298 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 KRT82Q9NSB4 513 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 SIRPGQ9P1W8 387 aa8.09□□□□□ -1.11
CASC19-238ENST00000641523 TMA7Q9Y2S6 64 aaKnown RBP8.09□□□□□ -1.11
CASC19-238ENST00000641523 SOS1Q07889 1333 aaPredicted RBP8.09□□□□□ -1.12
CASC19-238ENST00000641523 PXDNLA1KZ92 1463 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
CASC19-238ENST00000641523 NID1P14543 1247 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 PPP2R1AP30153 589 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 ZNF746Q6NUN9 644 aaPredicted RBP8.08□□□□□ -1.12
CASC19-238ENST00000641523 INTS5Q6P9B9 1019 aaKnown RBP8.08□□□□□ -1.12
CASC19-238ENST00000641523 MRFAP1L1Q96HT8 127 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 FMNL2Q96PY5 1086 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 PNNQ9H307 717 aaKnown RBP8.08□□□□□ -1.12
CASC19-238ENST00000641523 ANTXR1Q9H6X2 564 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 PRDM6Q9NQX0 595 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 KCNK4Q9NYG8 393 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 CORINQ9Y5Q5 1042 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 COL15A1P39059 1388 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 CEMIPQ8WUJ3 1361 aa8.08□□□□□ -1.12
CASC19-238ENST00000641523 KCPQ6ZWJ8 1503 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 C4AP0C0L4 1744 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 TJP1Q07157 1748 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 DCDC2CA8MYV0 355 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 HTATSF1O43719 755 aaKnown RBP8.07□□□□□ -1.12
CASC19-238ENST00000641523 ADAM11O75078 769 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 DLGAP3O95886 979 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 CELA2BP08218 269 aaPredicted RBP8.07□□□□□ -1.12
CASC19-238ENST00000641523 SLURP2P0DP57 97 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 SLC39A6Q13433 755 aa8.07□□□□□ -1.12
CASC19-238ENST00000641523 NFE2L2Q16236 605 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms