RNA–Protein interactions for RNA: ENST00000641314.1

PHGDH-214, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-214ENST00000641314 FBXO11Q86XK2 927 aa20.2■□□□□ 0.82
PHGDH-214ENST00000641314 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
PHGDH-214ENST00000641314 USP28Q96RU2 1077 aa20.2■□□□□ 0.82
PHGDH-214ENST00000641314 AMNQ9BXJ7 453 aa20.2■□□□□ 0.82
PHGDH-214ENST00000641314 FTOQ9C0B1 505 aaKnown RBP eCLIP20.2■□□□□ 0.82
PHGDH-214ENST00000641314 ZMYND12Q9H0C1 365 aa20.2■□□□□ 0.82
PHGDH-214ENST00000641314 PCDHA1Q9Y5I3 950 aa20.2■□□□□ 0.82
PHGDH-214ENST00000641314 ADCY7P51828 1080 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 USH1GQ495M9 461 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 GALNT17Q6IS24 598 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 PPP1R18Q6NYC8 613 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 DAGLBQ8NCG7 672 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 RASGRP4Q8TDF6 673 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 OPTNQ96CV9 577 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 CFAP45Q9UL16 551 aa20.19■□□□□ 0.82
PHGDH-214ENST00000641314 FAM205CA6NFA0 338 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 IRF6O14896 467 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 GNA11P29992 359 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 CSPP1Q1MSJ5 1256 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 C2orf69Q8N8R5 385 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 PRPF38AQ8NAV1 312 aaKnown RBP20.18■□□□□ 0.82
PHGDH-214ENST00000641314 TNFRSF25Q93038 417 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 SLC10A4Q96EP9 437 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 SPATA32Q96LK8 384 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 SCAND2PQ9GZW5 306 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-214ENST00000641314 RANBP17Q9H2T7 1088 aaKnown RBP20.18■□□□□ 0.82
PHGDH-214ENST00000641314 GPBP1L1Q9HC44 474 aaPredicted RBP20.18■□□□□ 0.82
PHGDH-214ENST00000641314 PTPRFP10586 1907 aa20.18■□□□□ 0.82
PHGDH-214ENST00000641314 ESYT2A0FGR8 921 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 TAL1P17542 331 aaPredicted RBP20.17■□□□□ 0.82
PHGDH-214ENST00000641314 FKBP1BP68106 108 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 PPIL2Q13356 520 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 NOM1Q5C9Z4 860 aaKnown RBP20.17■□□□□ 0.82
PHGDH-214ENST00000641314 SH3D19Q5HYK7 790 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 EARS2Q5JPH6 523 aaKnown RBP20.17■□□□□ 0.82
PHGDH-214ENST00000641314 ATL3Q6DD88 541 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 GADL1Q6ZQY3 521 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 LMBRD1Q9NUN5 540 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 ATP2B1P20020 1258 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 PTMSP20962 102 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 TPRNQ4KMQ1 711 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 PIK3AP1Q6ZUJ8 805 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 PPP1R9AQ9ULJ8 1098 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 PCDHA6Q9UN73 950 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 PCDHA8Q9Y5H6 950 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 CLIC4Q9Y696 253 aa20.17■□□□□ 0.82
PHGDH-214ENST00000641314 CCDC194A0A1B0GVG4 234 aa20.16■□□□□ 0.82
PHGDH-214ENST00000641314 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-214ENST00000641314 TMEM87AQ8NBN3 555 aa20.16■□□□□ 0.82
PHGDH-214ENST00000641314 BICD2Q8TD16 824 aa20.16■□□□□ 0.82
PHGDH-214ENST00000641314 LEO1Q8WVC0 666 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-214ENST00000641314 NOL7Q9UMY1 257 aaKnown RBP20.16■□□□□ 0.82
PHGDH-214ENST00000641314 CTDP1Q9Y5B0 961 aaPredicted RBP20.16■□□□□ 0.82
PHGDH-214ENST00000641314 A0A0G2JLL6 359 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-214ENST00000641314 CXCL11O14625 94 aa20.15■□□□□ 0.82
PHGDH-214ENST00000641314 ANO1Q5XXA6 986 aa20.15■□□□□ 0.82
PHGDH-214ENST00000641314 PRRT2Q7Z6L0 340 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-214ENST00000641314 REXO1Q8N1G1 1221 aaKnown RBP20.15■□□□□ 0.82
PHGDH-214ENST00000641314 CUL5Q93034 780 aa20.15■□□□□ 0.82
PHGDH-214ENST00000641314 RIC8AQ9NPQ8 531 aa20.15■□□□□ 0.82
PHGDH-214ENST00000641314 RTEL1Q9NZ71 1219 aa20.15■□□□□ 0.82
PHGDH-214ENST00000641314 BIN2Q9UBW5 565 aaPredicted RBP20.15■□□□□ 0.82
PHGDH-214ENST00000641314 PARP14Q460N5 1801 aa20.15■□□□□ 0.82
PHGDH-214ENST00000641314 UNCXA6NJT0 531 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L15C9J2P7 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L13C9JLJ4 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L11C9JVI0 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L18D6R9N7 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L22D6RA61 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L17D6RBQ6 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L19D6RCP7 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L20D6RJB6 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 M0R2N6 131 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 TOB1P50616 345 aaPredicted RBP20.14■□□□□ 0.81
PHGDH-214ENST00000641314 USP17L24Q0WX57 530 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 TRAF1Q13077 416 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 UBE2SQ16763 222 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 RILPL1Q5EBL4 403 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 TREML2Q5T2D2 321 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 JAKMIP3Q5VZ66 844 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 CATSPERGQ6ZRH7 1159 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 ATG4CQ96DT6 458 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 PSTPIP2Q9H939 334 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 POLR3EQ9NVU0 708 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 TMEM260Q9NX78 707 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 KCNH4Q9UQ05 1017 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 LOC285556D6RIA3 1793 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 TRPM7Q96QT4 1865 aa20.14■□□□□ 0.81
PHGDH-214ENST00000641314 GADD45BO75293 160 aaPredicted RBP20.13■□□□□ 0.81
PHGDH-214ENST00000641314 GJA5P36382 358 aa20.13■□□□□ 0.81
PHGDH-214ENST00000641314 MRPL12P52815 198 aaKnown RBP20.13■□□□□ 0.81
PHGDH-214ENST00000641314 STK38Q15208 465 aa20.13■□□□□ 0.81
PHGDH-214ENST00000641314 SF3A1Q15459 793 aaKnown RBP20.13■□□□□ 0.81
PHGDH-214ENST00000641314 CST9Q5W186 159 aa20.13■□□□□ 0.81
PHGDH-214ENST00000641314 KRT25Q7Z3Z0 450 aa20.13■□□□□ 0.81
PHGDH-214ENST00000641314 ZBED4O75132 1171 aa20.12■□□□□ 0.81
PHGDH-214ENST00000641314 COG2Q14746 738 aa20.12■□□□□ 0.81
PHGDH-214ENST00000641314 CPXCR1Q8N123 301 aa20.12■□□□□ 0.81
PHGDH-214ENST00000641314 PROCA1Q8NCQ7 364 aaPredicted RBP20.12■□□□□ 0.81
PHGDH-214ENST00000641314 AGBL1Q96MI9 1066 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms