RNA–Protein interactions for RNA: ENST00000640859.1

GFAP-238, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,162 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-238ENST00000640859 RBM5P52756 815 aaKnown RBP eCLIP12.82□□□□□ -0.36
GFAP-238ENST00000640859 ASPRV1Q53RT3 343 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 EAPPQ56P03 285 aaPredicted RBP12.82□□□□□ -0.36
GFAP-238ENST00000640859 NT5DC1Q5TFE4 455 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 USP50Q70EL3 339 aaPredicted RBP12.82□□□□□ -0.36
GFAP-238ENST00000640859 SH3BP5LQ7L8J4 393 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 HEATR3Q7Z4Q2 680 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 SH3RF1Q7Z6J0 888 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 MICALL2Q8IY33 904 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 RRP36Q96EU6 259 aaKnown RBP12.82□□□□□ -0.36
GFAP-238ENST00000640859 EPSTI1Q96J88 318 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 ZMYND12Q9H0C1 365 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 DHX36Q9H2U1 1008 aaKnown RBP12.82□□□□□ -0.36
GFAP-238ENST00000640859 CPVLQ9H3G5 476 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 KCNF1Q9H3M0 494 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
GFAP-238ENST00000640859 MAN1B1Q9UKM7 699 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 SBF1O95248 1867 aa12.82□□□□□ -0.36
GFAP-238ENST00000640859 A0A087X0B3 334 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 ESYT2A0FGR8 921 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 OFD1O75665 1012 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 POSTNQ15063 836 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 IL17AQ16552 155 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 PPP4R3BQ5MIZ7 849 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 ARL6IP4Q66PJ3 421 aaKnown RBP12.81□□□□□ -0.36
GFAP-238ENST00000640859 PIP4P2Q8N4L2 257 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 SPATA20Q8TB22 786 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 RASGRP4Q8TDF6 673 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 CCDC12Q8WUD4 166 aaPredicted RBP12.81□□□□□ -0.36
GFAP-238ENST00000640859 SYMPKQ92797 1274 aaKnown RBP12.81□□□□□ -0.36
GFAP-238ENST00000640859 PIGSQ96S52 555 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 UBA5Q9GZZ9 404 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 DNAJC18Q9H819 358 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 NMRK2Q9NPI5 230 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 CLIP2Q9UDT6 1046 aa12.81□□□□□ -0.36
GFAP-238ENST00000640859 DICER1Q9UPY3 1922 aaKnown RBP12.81□□□□□ -0.36
GFAP-238ENST00000640859 CCDC194A0A1B0GVG4 234 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 DDTLA6NHG4 134 aaPredicted RBP12.8□□□□□ -0.36
GFAP-238ENST00000640859 hCG_1984214I3L0E3 225 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 SLFN14P0C7P3 912 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 BMP6P22004 513 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 MCM7P33993 719 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 NAPAP54920 295 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 ZNF543Q08ER8 600 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 MORC3Q14149 939 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 DLGAP5Q15398 846 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 RBM26Q5T8P6 1007 aaKnown RBP12.8□□□□□ -0.36
GFAP-238ENST00000640859 ISM2Q6H9L7 571 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 CCDC186Q7Z3E2 898 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 CLEC10AQ8IUN9 316 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 LRRC47Q8N1G4 583 aaKnown RBP12.8□□□□□ -0.36
GFAP-238ENST00000640859 PDILTQ8N807 584 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 ZNF713Q8N859 430 aaPredicted RBP12.8□□□□□ -0.36
GFAP-238ENST00000640859 TRIML1Q8N9V2 468 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 MKL1Q969V6 931 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
GFAP-238ENST00000640859 VAT1LQ9HCJ6 419 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 C6orf50Q9HD87 102 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 PI4KBQ9UBF8 816 aa12.8□□□□□ -0.36
GFAP-238ENST00000640859 FRMPD2Q68DX3 1309 aaPredicted RBP12.8□□□□□ -0.36
GFAP-238ENST00000640859 VWA3AA6NCI4 1184 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 SMCO2A6NFE2 343 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 ENTPD3O75355 529 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 TOMM70O94826 608 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 SLURP2P0DP57 97 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 PTGS1P23219 599 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 GNA11P29992 359 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 EPS15P42566 896 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 CACNB3P54284 484 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 KIF4BQ2VIQ3 1234 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 CFAP100Q494V2 611 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 TATDN1Q6P1N9 297 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 KRT25Q7Z3Z0 450 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 LDHDQ86WU2 507 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 DRC7Q8IY82 874 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 GRAMD1CQ8IYS0 662 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 SMARCE1Q969G3 411 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 DHX58Q96C10 678 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 DCPSQ96C86 337 aaKnown RBP12.79□□□□□ -0.36
GFAP-238ENST00000640859 PAGE5Q96GU1 130 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 HSD3B7Q9H2F3 369 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 SEC63Q9UGP8 760 aaKnown RBP12.79□□□□□ -0.36
GFAP-238ENST00000640859 NRBP1Q9UHY1 535 aa12.79□□□□□ -0.36
GFAP-238ENST00000640859 COL2A1P02458 1487 aaPredicted RBP12.78□□□□□ -0.36
GFAP-238ENST00000640859 COL4A5P29400 1685 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 LONP1P36776 959 aaKnown RBP12.78□□□□□ -0.36
GFAP-238ENST00000640859 TPM4P67936 248 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 TCP10Q12799 353 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 E2F4Q16254 413 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 INF2Q27J81 1249 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 HOMER1Q86YM7 354 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 MLKLQ8NB16 471 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 SMC1BQ8NDV3 1235 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 ZC3H15Q8WU90 426 aaKnown RBP12.78□□□□□ -0.36
GFAP-238ENST00000640859 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 CCDC34Q96HJ3 373 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 GMLQ99445 158 aa12.78□□□□□ -0.36
GFAP-238ENST00000640859 PYM1Q9BRP8 204 aaKnown RBP12.78□□□□□ -0.36
GFAP-238ENST00000640859 TMEM60Q9H2L4 133 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms