RNA–Protein interactions for RNA: ENST00000640414.1

MECP2-226, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-226ENST00000640414 NOC4LQ9BVI4 516 aaKnown RBP13.87□□□□□ -0.19
MECP2-226ENST00000640414 VCPKMTQ9H867 229 aa13.87□□□□□ -0.19
MECP2-226ENST00000640414 SPC25Q9HBM1 224 aa13.87□□□□□ -0.19
MECP2-226ENST00000640414 ZNF214Q9UL59 606 aaPredicted RBP13.87□□□□□ -0.19
MECP2-226ENST00000640414 TMX2Q9Y320 296 aa13.87□□□□□ -0.19
MECP2-226ENST00000640414 TRANK1O15050 2925 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 VWA5AO00534 786 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 HMMRO75330 724 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 ACVR2BQ13705 512 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 CCDC144BQ3MJ40 725 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 TNNI3KQ59H18 835 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 RPUSD2Q8IZ73 545 aaKnown RBP13.86□□□□□ -0.19
MECP2-226ENST00000640414 SLC43A3Q8NBI5 491 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 REPS2Q8NFH8 660 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 RIOK1Q9BRS2 568 aaKnown RBP13.86□□□□□ -0.19
MECP2-226ENST00000640414 DCTPP1Q9H773 170 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 FPGT-TNNI3KV9GXZ4 949 aa13.86□□□□□ -0.19
MECP2-226ENST00000640414 DNAJC25-GNG10A0A024R161 153 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 ARHGEF15O94989 841 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 COPB2P35606 906 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 BEX3Q00994 111 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 ICA1Q05084 483 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 TTLL4Q14679 1199 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 CXCL17Q6UXB2 119 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 CENPQQ7L2Z9 268 aaPredicted RBP13.85□□□□□ -0.19
MECP2-226ENST00000640414 ARNTL2Q8WYA1 636 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 SCLYQ96I15 445 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 UIMC1Q96RL1 719 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 TRPV6Q9H1D0 765 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 SH2D4AQ9H788 454 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 ARHGEF10LQ9HCE6 1279 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 GPR108Q9NPR9 543 aa13.85□□□□□ -0.19
MECP2-226ENST00000640414 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.85□□□□□ -0.19
MECP2-226ENST00000640414 NKX3-2P78367 333 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 TAP1Q03518 808 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 GRB10Q13322 594 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 ZNF467Q7Z7K2 595 aaPredicted RBP13.84□□□□□ -0.19
MECP2-226ENST00000640414 SMC5Q8IY18 1101 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 GJD3Q8N144 294 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 DDX11Q96FC9 970 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 FBXL18Q96ME1 805 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 ABHD16BQ9H3Z7 469 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 MCM9Q9NXL9 1143 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 PPP1R9AQ9ULJ8 1098 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 COL4A4P53420 1690 aaPredicted RBP13.84□□□□□ -0.19
MECP2-226ENST00000640414 GRIN2DO15399 1336 aa13.84□□□□□ -0.19
MECP2-226ENST00000640414 B4GALT4O60513 344 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 LPXNO60711 386 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 AKR1B1P15121 316 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 ITGA7Q13683 1181 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 FGD4Q96M96 766 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 AGBL1Q96MI9 1066 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 RIPK3Q9Y572 518 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 MCM3APO60318 1980 aa13.83□□□□□ -0.2
MECP2-226ENST00000640414 SURF6O75683 361 aaKnown RBP13.82□□□□□ -0.2
MECP2-226ENST00000640414 CYP2D6P10635 497 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 ARMCX2Q7L311 632 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 SPRED2Q7Z698 418 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 FAM178BQ8IXR5 827 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 DYNLL2Q96FJ2 89 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 TEX13BQ9BXU2 312 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 KATNBL1Q9H079 304 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 ANTXR1Q9H6X2 564 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 TLR7Q9NYK1 1049 aaKnown RBP13.82□□□□□ -0.2
MECP2-226ENST00000640414 DBNLQ9UJU6 430 aaKnown RBP13.82□□□□□ -0.2
MECP2-226ENST00000640414 NOP58Q9Y2X3 529 aaKnown RBP13.82□□□□□ -0.2
MECP2-226ENST00000640414 ASTN1O14525 1302 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 MYH8P13535 1937 aa13.82□□□□□ -0.2
MECP2-226ENST00000640414 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.81□□□□□ -0.2
MECP2-226ENST00000640414 CABYRO75952 493 aa13.81□□□□□ -0.2
MECP2-226ENST00000640414 PFKMP08237 780 aa13.81□□□□□ -0.2
MECP2-226ENST00000640414 CSPP1Q1MSJ5 1256 aa13.81□□□□□ -0.2
MECP2-226ENST00000640414 FAM83BQ5T0W9 1011 aa13.81□□□□□ -0.2
MECP2-226ENST00000640414 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
MECP2-226ENST00000640414 SLC9A7Q96T83 725 aa13.81□□□□□ -0.2
MECP2-226ENST00000640414 SWAP70Q9UH65 585 aa13.81□□□□□ -0.2
MECP2-226ENST00000640414 EXOC6BQ9Y2D4 811 aa13.81□□□□□ -0.2
MECP2-226ENST00000640414 MAGEB6P1A0A0J9YX57 407 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 EEF2P13639 858 aaKnown RBP13.8□□□□□ -0.2
MECP2-226ENST00000640414 ALADP13716 330 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 SSTR3P32745 418 aaPredicted RBP13.8□□□□□ -0.2
MECP2-226ENST00000640414 PSMC6P62333 389 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 ANKRD45Q5TZF3 282 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 DEFB128Q7Z7B8 93 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 SDR42E1Q8WUS8 393 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 KCNH6Q9H252 994 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 DCP1AQ9NPI6 582 aaPredicted RBP13.8□□□□□ -0.2
MECP2-226ENST00000640414 SCN5AQ14524 2016 aa13.8□□□□□ -0.2
MECP2-226ENST00000640414 IL9P15248 144 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 PTGS1P23219 599 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 SLC4A3P48751 1232 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 NUCB1Q02818 461 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 FSCN1Q16658 493 aaKnown RBP13.79□□□□□ -0.2
MECP2-226ENST00000640414 SKAP1Q86WV1 359 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 HERC6Q8IVU3 1022 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 CCDC144CPQ8IYA2 1237 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 PHOSPHO2Q8TCD6 241 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 SLF1Q9BQI6 1058 aa13.79□□□□□ -0.2
MECP2-226ENST00000640414 SEZ6LQ9BYH1 1024 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms