RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 TUBA3CQ13748 450 aa6.78□□□□□ -1.32
NECAP1-222ENST00000640072 BEND5Q7L4P6 421 aa6.78□□□□□ -1.32
NECAP1-222ENST00000640072 NLRP14Q86W24 1093 aa6.78□□□□□ -1.32
NECAP1-222ENST00000640072 LPIN2Q92539 896 aa6.78□□□□□ -1.32
NECAP1-222ENST00000640072 MOGAT1Q96PD6 335 aa6.78□□□□□ -1.32
NECAP1-222ENST00000640072 PA2G4Q9UQ80 394 aaKnown RBP6.78□□□□□ -1.32
NECAP1-222ENST00000640072 SPG7Q9UQ90 795 aa6.78□□□□□ -1.32
NECAP1-222ENST00000640072 ERICH2A1L162 156 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 PRRT4C9JH25 899 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 POTEB2H3BUK9 544 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 RNF8O76064 485 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CTNNA1P35221 906 aaKnown RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 SCNN1AP37088 669 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CETN2P41208 172 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 EPS15P42566 896 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 POLE2P56282 527 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 MYO1EQ12965 1108 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 PUM3Q15397 648 aaKnown RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 VPS53Q5VIR6 699 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 PPP4R3AQ6IN85 833 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 BTNL9Q6UXG8 535 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CEP128Q6ZU80 1094 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 RAB11FIP4Q86YS3 637 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 ESX1Q8N693 406 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 LRRN4CLQ8ND94 238 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 NR1H4Q96RI1 486 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CSRNP2Q9H175 543 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 BAIAP2L1Q9UHR4 511 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 GTF2A1LQ9UNN4 478 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 ATP6V1DQ9Y5K8 247 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CUL7Q14999 1698 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 GOLGA8AA7E2F4 631 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 SCGB1D2O95969 90 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 SERPINC1P01008 464 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 TROVE2P10155 538 aaKnown RBP eCLIP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 UBE2HP62256 183 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 MAP3K11Q16584 847 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 HIBCHQ6NVY1 386 aaPredicted RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CCDC129Q6ZRS4 1044 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 RSRC2Q7L4I2 434 aaKnown RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 PROM2Q8N271 834 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 USP38Q8NB14 1042 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 FAM161BQ96MY7 647 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CCT7Q99832 543 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 HOMER2Q9NSB8 354 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 VTI1BQ9UEU0 232 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 RIMKLBQ9ULI2 386 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 GNEQ9Y223 722 aaKnown RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 NOSIPQ9Y314 301 aaKnown RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 TSPAN1O60635 241 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 KCNJ13O60928 360 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 ARIH2O95376 493 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 C7P10643 843 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 MTHFRP42898 656 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 SEPHS1P49903 392 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 SP140Q13342 867 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 CCDC38Q502W7 563 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 NOC3LQ8WTT2 800 aaKnown RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 MTMR9Q96QG7 549 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 MRPL46Q9H2W6 279 aaKnown RBP6.77□□□□□ -1.33
NECAP1-222ENST00000640072 LGR6Q9HBX8 967 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 NDFIP2Q9NV92 336 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 MYO1AQ9UBC5 1043 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 ATPIF1Q9UII2 106 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 PCDHGC5Q9Y5F6 944 aa6.77□□□□□ -1.33
NECAP1-222ENST00000640072 ABCA10Q8WWZ4 1543 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 RTEL1-TNFRSF6BF6WH68 1400 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 AP5Z1O43299 807 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 CHMLP26374 656 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 CHKAP35790 457 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 PDE6CP51160 858 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 SMTNP53814 917 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 ETF1P62495 437 aaKnown RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 NFIAQ12857 509 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 IL31Q6EBC2 164 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 SMYD5Q6GMV2 418 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 SWSAP1Q6NVH7 229 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 SH3BP5LQ7L8J4 393 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 MAB21L3Q8N8X9 362 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 SPATA5Q8NB90 893 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 GOT1L1Q8NHS2 421 aaPredicted RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 MAML1Q92585 1016 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 RBM18Q96H35 190 aaKnown RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 FERD3LQ96RJ6 166 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 WDR33Q9C0J8 1336 aaKnown RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 TARSL2A2RTX5 802 aaKnown RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 CASQ2O14958 399 aaPredicted RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 TSPAN6O43657 245 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 ACSL4O60488 711 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 N4BP1O75113 896 aaKnown RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 RNF40O75150 1001 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 RAC2P15153 192 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 PEX5P50542 639 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 CCT8P50990 548 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 GSDMDP57764 484 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 CTAG1AP78358 180 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 PLIN5Q00G26 463 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 PPIDQ08752 370 aaKnown RBP6.76□□□□□ -1.33
NECAP1-222ENST00000640072 SLFN5Q08AF3 891 aa6.76□□□□□ -1.33
NECAP1-222ENST00000640072 MTX1Q13505 466 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms