RNA–Protein interactions for RNA: ENST00000640036.1

SCN1A-218, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,131 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-218ENST00000640036 RAB11FIP4Q86YS3 637 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PI4K2BQ8TCG2 481 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 NCAPGQ9BPX3 1015 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 TXNDC16Q9P2K2 825 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 IPO11Q9UI26 975 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PSMA7O14818 248 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PQBP1O60828 265 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 HMGCS2P54868 508 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PLEKHH3Q7Z736 793 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SUGP1Q8IWZ8 645 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 RAB3IL1Q8TBN0 382 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 COPRSQ9NQ92 184 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 GINM1Q9NU53 330 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 MROH7Q68CQ1 1323 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 ARHGEF40Q8TER5 1519 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 DYNC1LI2O43237 492 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 MBD3O95983 291 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 HSPD1P10809 573 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 ALDH7A1P49419 539 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PTPAQ15257 358 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 CEP135Q66GS9 1140 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SLFN12Q8IYM2 578 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 DONSONQ9NYP3 566 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 MYPNQ86TC9 1320 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PNPLA6Q8IY17 1366 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 ARHGAP31Q2M1Z3 1444 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 DNMT1P26358 1616 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PFDN6O15212 129 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SKIP12755 728 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 MARK3P27448 753 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 TMEM132BQ14DG7 1078 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 ARHGAP15Q53QZ3 475 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SYDE2Q5VT97 1194 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 MYOCDQ8IZQ8 938 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PRPF38AQ8NAV1 312 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 GLIS2Q9BZE0 524 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 EHD2Q9NZN4 543 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 MOSPD1Q9UJG1 213 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PALD1Q9ULE6 856 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 DCCP43146 1447 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 PRRG1O14668 218 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 EEF2P13639 858 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 TNNT1P13805 278 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 MCM7P33993 719 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 TSPY1Q01534 308 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 CYP4A11Q02928 519 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 CALCRLQ16602 461 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 THNSL1Q8IYQ7 743 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 NSUN6Q8TEA1 469 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 ZC3H15Q8WU90 426 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 UPF3BQ9BZI7 483 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 SEC31BQ9NQW1 1179 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 LARSQ9P2J5 1176 aaKnown RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 FRMPD2Q68DX3 1309 aaPredicted RBP5.57□□□□□ -1.52
SCN1A-218ENST00000640036 ABCC3O15438 1527 aa5.57□□□□□ -1.52
SCN1A-218ENST00000640036 C6orf163Q5TEZ5 329 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 SV2BQ7L1I2 683 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 MYCT1Q8N699 235 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 SH3TC2Q8TF17 1288 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PHLPP2Q6ZVD8 1323 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 ARID4AP29374 1257 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 GLB1LQ6UWU2 654 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 ZNF592Q92610 1267 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 LPAR1Q92633 364 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 AKAP7Q9P0M2 348 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 MAP10Q9P2G4 905 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 CNTNAP4Q9C0A0 1308 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 CLASP1Q7Z460 1538 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 B4E1Z4 1266 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 ADCY3O60266 1144 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 USO1O60763 962 aaKnown RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PSAPP07602 524 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 TNNC1P63316 161 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 POSTNQ15063 836 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 MAP9Q49MG5 647 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 IPO4Q8TEX9 1081 aaKnown RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 IKBKGQ9Y6K9 419 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 GLTPD2A6NH11 291 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 TADA2AO75478 443 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 ZAP70P43403 619 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 ADALQ6DHV7 355 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 NLRP4Q96MN2 994 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 TRERF1Q96PN7 1200 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 GCOM2Q9BZD3 368 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 WDR64B1ANS9 1081 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 CYP19A1P11511 503 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PRPHP41219 470 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 TBC1D9Q6ZT07 1266 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 MICALCLQ6ZW33 695 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 SEPT8Q92599 483 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PHACTR3Q96KR7 559 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 RNF146Q9NTX7 359 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 CPA4Q9UI42 421 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PAXBP1Q9Y5B6 917 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 KLRF2D3W0D1 207 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PRPF40AO75400 957 aaKnown RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PREPLQ4J6C6 727 aaPredicted RBP5.56□□□□□ -1.52
SCN1A-218ENST00000640036 ANKRD13CQ8N6S4 541 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 PNMA1Q8ND90 353 aa5.56□□□□□ -1.52
SCN1A-218ENST00000640036 SHCBP1Q8NEM2 672 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms