RNA–Protein interactions for RNA: ENST00000639876.1

TRIO-225, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5 BASIC

Gene TRIO, Length 769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-225ENST00000639876 SLC38A10Q9HBR0 1119 aa11.13□□□□□ -0.63
TRIO-225ENST00000639876 ANAPC4Q9UJX5 808 aa11.13□□□□□ -0.63
TRIO-225ENST00000639876 PHF24Q9UPV7 400 aa11.13□□□□□ -0.63
TRIO-225ENST00000639876 TACC3Q9Y6A5 838 aa11.13□□□□□ -0.63
TRIO-225ENST00000639876 COL11A1P12107 1806 aaPredicted RBP11.13□□□□□ -0.63
TRIO-225ENST00000639876 PLXNA1Q9UIW2 1896 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 TRIOBPQ9H2D6 2365 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 ASB14A6NK59 587 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 B4DLN1 442 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 ORC4O43929 436 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 PEX10O60683 326 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 CST5P28325 142 aaPredicted RBP11.12□□□□□ -0.63
TRIO-225ENST00000639876 MRPL12P52815 198 aaKnown RBP11.12□□□□□ -0.63
TRIO-225ENST00000639876 RTP1P59025 263 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 LRRC41Q15345 812 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 ANKRD45Q5TZF3 282 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 SLFN13Q68D06 897 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 SLC39A5Q6ZMH5 540 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 CCDC129Q6ZRS4 1044 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 DCAF4Q8WV16 495 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 STAG1Q8WVM7 1258 aa11.12□□□□□ -0.63
TRIO-225ENST00000639876 RWDD1Q9H446 243 aaPredicted RBP11.12□□□□□ -0.63
TRIO-225ENST00000639876 EPB41L4AQ9HCS5 686 aaPredicted RBP11.12□□□□□ -0.63
TRIO-225ENST00000639876 ELP1O95163 1332 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 MKI67P46013 3256 aaKnown RBP11.11□□□□□ -0.63
TRIO-225ENST00000639876 DNAJC25-GNG10A0A024R161 153 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 TMEM265A0A087WTH1 108 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 M0R2C6 588 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 ZEB2O60315 1214 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 DUSP11O75319 330 aaKnown RBP11.11□□□□□ -0.63
TRIO-225ENST00000639876 CABYRO75952 493 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 TFAP4Q01664 338 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 MCMDC2Q4G0Z9 681 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 KIAA1755Q5JYT7 1200 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 CLEC10AQ8IUN9 316 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 KIFC2Q96AC6 838 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 GLT1D1Q96MS3 346 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 TTC14Q96N46 770 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 TOX2Q96NM4 488 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.11□□□□□ -0.63
TRIO-225ENST00000639876 FBXO28Q9NVF7 368 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.11□□□□□ -0.63
TRIO-225ENST00000639876 ADD3Q9UEY8 706 aaKnown RBP11.11□□□□□ -0.63
TRIO-225ENST00000639876 ISY1Q9ULR0 285 aaKnown RBP11.11□□□□□ -0.63
TRIO-225ENST00000639876 STX8Q9UNK0 236 aa11.11□□□□□ -0.63
TRIO-225ENST00000639876 SALL3Q9BXA9 1300 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 ZNFX1Q9P2E3 1918 aaKnown RBP11.1□□□□□ -0.63
TRIO-225ENST00000639876 DCDC2CA8MYV0 355 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 TLR3O15455 904 aaKnown RBP11.1□□□□□ -0.63
TRIO-225ENST00000639876 SYN1P17600 705 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 PDE1AP54750 535 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 FAM47AQ5JRC9 791 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 GJC2Q5T442 439 aaPredicted RBP11.1□□□□□ -0.63
TRIO-225ENST00000639876 TRPV1Q8NER1 839 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 TCP11L1Q9NUJ3 509 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 ATP11BQ9Y2G3 1177 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 PCDHB15Q9Y5E8 787 aa11.1□□□□□ -0.63
TRIO-225ENST00000639876 TMEM232C9JQI7 657 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 CLTBP09497 229 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 FGRP09769 529 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 TOP1P11387 765 aaKnown RBP11.09□□□□□ -0.63
TRIO-225ENST00000639876 SLFNL1Q499Z3 407 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 CPXCR1Q8N123 301 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 LRRC47Q8N1G4 583 aaKnown RBP11.09□□□□□ -0.63
TRIO-225ENST00000639876 MTIF3Q9H2K0 278 aaKnown RBP11.09□□□□□ -0.63
TRIO-225ENST00000639876 STARD7Q9NQZ5 370 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 ZHX1Q9UKY1 873 aaPredicted RBP11.09□□□□□ -0.63
TRIO-225ENST00000639876 STXBP5LQ9Y2K9 1186 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
TRIO-225ENST00000639876 Q9Y3F1 56 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 CCDC171Q6TFL3 1326 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 RAD50Q92878 1312 aa11.09□□□□□ -0.63
TRIO-225ENST00000639876 A0A1W2PQ45 241 aaPredicted RBP11.08□□□□□ -0.64
TRIO-225ENST00000639876 A0A1W2PQY0 241 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 RANBP6O60518 1105 aaKnown RBP11.08□□□□□ -0.64
TRIO-225ENST00000639876 PRDM1O75626 825 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 PGK2P07205 417 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 ZNF865P0CJ78 1059 aaPredicted RBP11.08□□□□□ -0.64
TRIO-225ENST00000639876 ADCYAP1R1P41586 468 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 NOVP48745 357 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 NKX3-2P78367 333 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 TRAF1Q13077 416 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 ACVR2BQ13705 512 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 BRDTQ58F21 947 aaPredicted RBP11.08□□□□□ -0.64
TRIO-225ENST00000639876 GPATCH4Q5T3I0 446 aaKnown RBP11.08□□□□□ -0.64
TRIO-225ENST00000639876 TSHZ3Q63HK5 1081 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 ANKRD33Q7Z3H0 272 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 DEFB123Q8N688 67 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 ESR2Q92731 530 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 PRDM5Q9NQX1 630 aaPredicted RBP11.08□□□□□ -0.64
TRIO-225ENST00000639876 TOMM22Q9NS69 142 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.08□□□□□ -0.64
TRIO-225ENST00000639876 SYNRGQ9UMZ2 1314 aa11.08□□□□□ -0.64
TRIO-225ENST00000639876 LTBP2Q14767 1821 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 A0A0U1RQG5 324 aaPredicted RBP11.07□□□□□ -0.64
TRIO-225ENST00000639876 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 KIAA0355O15063 1070 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 ST18O60284 1047 aa11.07□□□□□ -0.64
TRIO-225ENST00000639876 ADAMTS4O75173 837 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms