RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 STXBP3O00186 592 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 TATDN1Q6P1N9 297 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 GRAMD1CQ8IYS0 662 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 CCDC150Q8NCX0 1101 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 RASGRP4Q8TDF6 673 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 SYMPKQ92797 1274 aaKnown RBP17.15■□□□□ 0.34
TRIM3-215ENST00000639856 DHX58Q96C10 678 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 CCDC17Q96LX7 622 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 C16orf45Q96MC5 204 aaPredicted RBP17.15■□□□□ 0.34
TRIM3-215ENST00000639856 CSRNP1Q96S65 589 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 FANCLQ9NW38 375 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 CD2APQ9Y5K6 639 aa17.15■□□□□ 0.34
TRIM3-215ENST00000639856 CBFA2T2O43439 604 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 SERPINC1P01008 464 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 SLFN14P0C7P3 912 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 SNHG28P0DPA3 235 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 UBASH3AP57075 661 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 BLIDQ8IZY5 108 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 PIGSQ96S52 555 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 GPCPD1Q9NPB8 672 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 BARHL2Q9NY43 387 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 JAG1P78504 1218 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 RASSF7Q02833 373 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 RRP1BQ14684 758 aaKnown RBP17.14■□□□□ 0.33
TRIM3-215ENST00000639856 TPD52L1Q16890 204 aaPredicted RBP17.14■□□□□ 0.33
TRIM3-215ENST00000639856 AGBL3Q8NEM8 1001 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 NLGN2Q8NFZ4 835 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 JDP2Q8WYK2 163 aa17.14■□□□□ 0.33
TRIM3-215ENST00000639856 COL2A1P02458 1487 aaPredicted RBP17.13■□□□□ 0.33
TRIM3-215ENST00000639856 CNTNAP1P78357 1384 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 VWA3AA6NCI4 1184 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 RRP9O43818 475 aaKnown RBP17.13■□□□□ 0.33
TRIM3-215ENST00000639856 SEPT2Q15019 361 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 SPDYE2Q495Y8 402 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 CIAPIN1Q6FI81 312 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 SH3RF1Q7Z6J0 888 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 CDAN1Q8IWY9 1227 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 VEZTQ9HBM0 779 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 PCDHA4Q9UN74 947 aa17.13■□□□□ 0.33
TRIM3-215ENST00000639856 EEF2P13639 858 aaKnown RBP17.12■□□□□ 0.33
TRIM3-215ENST00000639856 TNNT1P13805 278 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 PRELPP51888 382 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 ZNF543Q08ER8 600 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 ASPRV1Q53RT3 343 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 ARMCX5Q6P1M9 558 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
TRIM3-215ENST00000639856 DPF2Q92785 391 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 RRP36Q96EU6 259 aaKnown RBP17.12■□□□□ 0.33
TRIM3-215ENST00000639856 KCND1Q9NSA2 647 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 SFPQP23246 707 aaKnown RBP eCLIP17.12■□□□□ 0.33
TRIM3-215ENST00000639856 TTBK2Q6IQ55 1244 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 SIAH1Q8IUQ4 282 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 RIOX1Q9H6W3 641 aa17.12■□□□□ 0.33
TRIM3-215ENST00000639856 M0R2N6 131 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 RAD21O60216 631 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 MCM7P33993 719 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 FMR1Q06787 632 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRIM3-215ENST00000639856 ABCB5Q2M3G0 1257 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 NBPF9Q3BBW0 867 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 KCTD1Q719H9 257 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 PAGE5Q96GU1 130 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 SEC63Q9UGP8 760 aaKnown RBP17.11■□□□□ 0.33
TRIM3-215ENST00000639856 SCAF8Q9UPN6 1271 aaKnown RBP17.11■□□□□ 0.33
TRIM3-215ENST00000639856 RIOK3O14730 519 aaKnown RBP17.11■□□□□ 0.33
TRIM3-215ENST00000639856 SMARCA1P28370 1054 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 AFMP43652 599 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 NAPAP54920 295 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 ICA1Q05084 483 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 HSP90AA2PQ14568 343 aaPredicted RBP17.11■□□□□ 0.33
TRIM3-215ENST00000639856 CCDC96Q2M329 555 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 ARL6IP4Q66PJ3 421 aaKnown RBP17.11■□□□□ 0.33
TRIM3-215ENST00000639856 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 CCDC148Q8NFR7 591 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 TMEM39BQ9GZU3 492 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 KANSL2Q9H9L4 492 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 NFE2L3Q9Y4A8 694 aa17.11■□□□□ 0.33
TRIM3-215ENST00000639856 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 EGFRP00533 1210 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 GH2P01242 217 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 ZNF18P17022 549 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 ERCC5P28715 1186 aaPredicted RBP17.1■□□□□ 0.33
TRIM3-215ENST00000639856 SLC16A2P36021 539 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 RBM10P98175 930 aaKnown RBP17.1■□□□□ 0.33
TRIM3-215ENST00000639856 CT47A1Q5JQC4 288 aaPredicted RBP17.1■□□□□ 0.33
TRIM3-215ENST00000639856 TMEM179Q6ZVK1 233 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 FAM177A1Q8N128 213 aaPredicted RBP17.1■□□□□ 0.33
TRIM3-215ENST00000639856 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 FAM151AQ8WW52 585 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 ZBED3Q96IU2 234 aaPredicted RBP17.1■□□□□ 0.33
TRIM3-215ENST00000639856 GSDMAQ96QA5 445 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
TRIM3-215ENST00000639856 PCDHA6Q9UN73 950 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 PCDHA8Q9Y5H6 950 aa17.1■□□□□ 0.33
TRIM3-215ENST00000639856 WNT10BO00744 389 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 KCNJ6P48051 423 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 DPYDQ12882 1025 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 CCAR2Q8N163 923 aaKnown RBP17.09■□□□□ 0.33
TRIM3-215ENST00000639856 MTMR14Q8NCE2 650 aa17.09■□□□□ 0.33
TRIM3-215ENST00000639856 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms