RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ETF1P62495 437 aaKnown RBP8.79□□□□□ -1
RFC1-217ENST00000639695 ZYXQ15942 572 aaKnown RBP8.79□□□□□ -1
RFC1-217ENST00000639695 PLEKHG6Q3KR16 790 aa8.79□□□□□ -1
RFC1-217ENST00000639695 MFSD4AQ8N468 514 aa8.79□□□□□ -1
RFC1-217ENST00000639695 SGSM3Q96HU1 749 aa8.79□□□□□ -1
RFC1-217ENST00000639695 CEP89Q96ST8 783 aa8.79□□□□□ -1
RFC1-217ENST00000639695 SLC9A7Q96T83 725 aa8.79□□□□□ -1
RFC1-217ENST00000639695 MIPEPQ99797 713 aa8.79□□□□□ -1
RFC1-217ENST00000639695 NSUN3Q9H649 340 aaKnown RBP8.79□□□□□ -1
RFC1-217ENST00000639695 PCDHB10Q9UN67 800 aa8.79□□□□□ -1
RFC1-217ENST00000639695 GRK4P32298 578 aa8.78□□□□□ -1
RFC1-217ENST00000639695 CCNFP41002 786 aa8.78□□□□□ -1
RFC1-217ENST00000639695 YARSP54577 528 aaKnown RBP8.78□□□□□ -1
RFC1-217ENST00000639695 C22orf34Q6ZV56 151 aa8.78□□□□□ -1
RFC1-217ENST00000639695 ANKLE2Q86XL3 938 aa8.78□□□□□ -1
RFC1-217ENST00000639695 ZNF507Q8TCN5 953 aa8.78□□□□□ -1
RFC1-217ENST00000639695 TPX2Q9ULW0 747 aaKnown RBP8.78□□□□□ -1
RFC1-217ENST00000639695 SLC10A6Q3KNW5 377 aa8.77□□□□□ -1.01
RFC1-217ENST00000639695 SFRP5Q5T4F7 317 aa8.77□□□□□ -1.01
RFC1-217ENST00000639695 KCT2Q8NC54 265 aa8.77□□□□□ -1.01
RFC1-217ENST00000639695 CHAC2Q8WUX2 184 aa8.77□□□□□ -1.01
RFC1-217ENST00000639695 NINJ1Q92982 152 aa8.77□□□□□ -1.01
RFC1-217ENST00000639695 MFSD3Q96ES6 412 aa8.77□□□□□ -1.01
RFC1-217ENST00000639695 ZNF214Q9UL59 606 aaPredicted RBP8.77□□□□□ -1.01
RFC1-217ENST00000639695 ARID4BQ4LE39 1312 aaPredicted RBP8.77□□□□□ -1.01
RFC1-217ENST00000639695 FAM86C2PA6NEL3 165 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 PARNO95453 639 aaKnown RBP8.76□□□□□ -1.01
RFC1-217ENST00000639695 PDGFRBP09619 1106 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 ZNF143P52747 638 aaPredicted RBP8.76□□□□□ -1.01
RFC1-217ENST00000639695 HSP90AB2PQ58FF8 381 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 LILRA6Q6PI73 481 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 FERMT3Q86UX7 667 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 NIM1KQ8IY84 436 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 PRPF38AQ8NAV1 312 aaKnown RBP8.76□□□□□ -1.01
RFC1-217ENST00000639695 ZSCAN18Q8TBC5 510 aaPredicted RBP8.76□□□□□ -1.01
RFC1-217ENST00000639695 CDC6Q99741 560 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 WNT10AQ9GZT5 417 aa8.76□□□□□ -1.01
RFC1-217ENST00000639695 CHURC1-FNTBB4DL54 471 aa8.75□□□□□ -1.01
RFC1-217ENST00000639695 CBX7O95931 251 aa8.75□□□□□ -1.01
RFC1-217ENST00000639695 MYCLP1P12525 358 aaPredicted RBP8.75□□□□□ -1.01
RFC1-217ENST00000639695 ERVFC1P60507 584 aa8.75□□□□□ -1.01
RFC1-217ENST00000639695 C21orf62-AS1Q17RA5 79 aa8.75□□□□□ -1.01
RFC1-217ENST00000639695 SV2CQ496J9 727 aa8.75□□□□□ -1.01
RFC1-217ENST00000639695 CT47A1Q5JQC4 288 aaPredicted RBP8.75□□□□□ -1.01
RFC1-217ENST00000639695 FBXO15Q8NCQ5 510 aaPredicted RBP8.75□□□□□ -1.01
RFC1-217ENST00000639695 KRTAP4-5Q9BYR2 181 aa8.75□□□□□ -1.01
RFC1-217ENST00000639695 HOMER2Q9NSB8 354 aa8.75□□□□□ -1.01
RFC1-217ENST00000639695 DNAJC25-GNG10A0A024R161 153 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 NPIPB6E9PJ23 425 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 ADCY3O60266 1144 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 DNAJA2O60884 412 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 RFPL3O75679 317 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 TM4SF20Q53R12 229 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 RALGPS1Q5JS13 557 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 LCE5AQ5TCM9 118 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 LETMD1Q6P1Q0 360 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 DHX37Q8IY37 1157 aaKnown RBP8.74□□□□□ -1.01
RFC1-217ENST00000639695 PHACTR4Q8IZ21 702 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 FAM13CQ8NE31 585 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 XAGE3Q8WTP9 111 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 STAG1Q8WVM7 1258 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 UBE2FQ969M7 185 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 APBA2Q99767 749 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 SLAMF8Q9P0V8 285 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 CHPF2Q9P2E5 772 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 LRP2BPQ9P2M1 347 aa8.74□□□□□ -1.01
RFC1-217ENST00000639695 WASH4PA8MWX3 477 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 SOX5P35711 763 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 CAP2P40123 477 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 HSP90AA2PQ14568 343 aaPredicted RBP8.73□□□□□ -1.01
RFC1-217ENST00000639695 SIAH1Q8IUQ4 282 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 MCATQ8IVS2 390 aaKnown RBP8.73□□□□□ -1.01
RFC1-217ENST00000639695 SLFN12Q8IYM2 578 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 KLHL6Q8WZ60 621 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 ACSF2Q96CM8 615 aaPredicted RBP8.73□□□□□ -1.01
RFC1-217ENST00000639695 ALPK1Q96QP1 1244 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 CAAP1Q9H8G2 361 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 ZSWIM5Q9P217 1185 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 G3BP2Q9UN86 482 aaKnown RBP8.73□□□□□ -1.01
RFC1-217ENST00000639695 ATP8A1Q9Y2Q0 1164 aa8.73□□□□□ -1.01
RFC1-217ENST00000639695 ANKRD34BA5PLL1 514 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 NFIBO00712 420 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 PMS1P54277 932 aaKnown RBP8.72□□□□□ -1.01
RFC1-217ENST00000639695 PABPC4Q13310 644 aaKnown RBP eCLIP8.72□□□□□ -1.01
RFC1-217ENST00000639695 PRAMEF13Q5VWM6 474 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 SLC6A19Q695T7 634 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 TTLL10Q6ZVT0 673 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 HID1Q8IV36 788 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 KIF2CQ99661 725 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 DHRS4Q9BTZ2 278 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 CD320Q9NPF0 282 aa8.72□□□□□ -1.01
RFC1-217ENST00000639695 TRAV20A0A0B4J274 112 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 RGS13O14921 159 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 PLD2O14939 933 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 ESR1P03372 595 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 GBP1P32455 592 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 TNK2Q07912 1038 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 SCUBE1Q8IWY4 988 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 TMEM87BQ96K49 555 aa8.71□□□□□ -1.02
RFC1-217ENST00000639695 CCDC74BQ96LY2 380 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms