RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 TMEM52Q8NDY8 209 aa5.15□□□□□ -1.59
ATM-228ENST00000639240 SHDQ96IW2 340 aa5.15□□□□□ -1.59
ATM-228ENST00000639240 FAM86C1Q9NVL1 165 aa5.15□□□□□ -1.59
ATM-228ENST00000639240 ZMYM5Q9UJ78 669 aa5.15□□□□□ -1.59
ATM-228ENST00000639240 FBXL21Q9UKT6 434 aa5.15□□□□□ -1.59
ATM-228ENST00000639240 FADS2P1A8MWK0 482 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 SHOXO15266 292 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 SIGLEC6O43699 453 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 SEMA7AO75326 666 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 TP53P04637 393 aaPredicted RBP5.14□□□□□ -1.59
ATM-228ENST00000639240 KIR2DL1P43626 348 aaPredicted RBP5.14□□□□□ -1.59
ATM-228ENST00000639240 KIR2DL2P43627 348 aaPredicted RBP5.14□□□□□ -1.59
ATM-228ENST00000639240 PMS1P54277 932 aaKnown RBP5.14□□□□□ -1.59
ATM-228ENST00000639240 EPHB3P54753 998 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 AUHQ13825 339 aaKnown RBP5.14□□□□□ -1.59
ATM-228ENST00000639240 ADGRF1Q5T601 910 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 CEP128Q6ZU80 1094 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 CCDC144CPQ8IYA2 1237 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 OR6P1Q8NGX9 317 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 ANAPC16Q96DE5 110 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 CNTD2Q9H8S5 307 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 STRIP2Q9ULQ0 834 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 LTBP3Q9NS15 1303 aa5.14□□□□□ -1.59
ATM-228ENST00000639240 A0A1W2PQH9 124 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 MEIS1O00470 390 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 SSBP05455 408 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATM-228ENST00000639240 VIPR1P32241 457 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 PCBP3P57721 371 aaKnown RBP5.13□□□□□ -1.59
ATM-228ENST00000639240 PPFIBP1Q86W92 1011 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 FAM169BQ8N8A8 192 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.13□□□□□ -1.59
ATM-228ENST00000639240 TINF2Q9BSI4 451 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 CRTAC1Q9NQ79 661 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 GFOD1Q9NXC2 390 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 RAPGEFL1Q9UHV5 662 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 KCTD3Q9Y597 815 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 PCDHB12Q9Y5F1 795 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 MRVI1Q9Y6F6 885 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 NCANO14594 1321 aa5.13□□□□□ -1.59
ATM-228ENST00000639240 A0A0G2JLL6 359 aaPredicted RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 OR14I1A6ND48 311 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 PRRG2O14669 202 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 TRIM13O60858 407 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 DNAJA1P31689 397 aaKnown RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 BUD31P41223 144 aaPredicted RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 RTP1P59025 263 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 YBX1P67809 324 aaKnown RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 SRSF3P84103 164 aaKnown RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 ARID5AQ03989 594 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 GNPTABQ3T906 1256 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 HSF5Q4G112 596 aaPredicted RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 AXDND1Q5T1B0 1012 aaPredicted RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 DCAF15Q66K64 600 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 TMEFF1Q8IYR6 380 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 C7orf61Q8IZ16 206 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 C19orf47Q8N9M1 422 aaKnown RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 SYTL4Q96C24 671 aaPredicted RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 KCNC2Q96PR1 638 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 CHST7Q9NS84 486 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 ERVK13-1Q9NX77 482 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 KLHL14Q9P2G3 628 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 ZNF214Q9UL59 606 aaPredicted RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 CNOT6Q9ULM6 557 aaKnown RBP5.12□□□□□ -1.59
ATM-228ENST00000639240 PCDHB10Q9UN67 800 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 SLC12A7Q9Y666 1083 aa5.12□□□□□ -1.59
ATM-228ENST00000639240 SSU72P8A0A1W2PR75 194 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 ZNF205O95201 554 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 PNLIPP16233 465 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 BMP7P18075 431 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 PI3P19957 117 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 CDR1P51861 262 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 ERVFRD-1P60508 538 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 SLC14A2Q15849 920 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 RTP2Q5QGT7 225 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 TMEM132EQ6IEE7 984 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 CRTC3Q6UUV7 619 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 SLCO6A1Q86UG4 719 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 MARCH10Q8NA82 808 aaPredicted RBP5.11□□□□□ -1.59
ATM-228ENST00000639240 SMARCC1Q92922 1105 aaPredicted RBP5.11□□□□□ -1.59
ATM-228ENST00000639240 PHAXQ9H814 394 aaKnown RBP5.11□□□□□ -1.59
ATM-228ENST00000639240 PARD6AQ9NPB6 346 aa5.11□□□□□ -1.59
ATM-228ENST00000639240 GPR55Q9Y2T6 319 aaPredicted RBP5.11□□□□□ -1.59
ATM-228ENST00000639240 B8ZZF3 427 aa5.1□□□□□ -1.59
ATM-228ENST00000639240 IRS4O14654 1257 aaPredicted RBP5.1□□□□□ -1.59
ATM-228ENST00000639240 VAV1P15498 845 aa5.1□□□□□ -1.59
ATM-228ENST00000639240 CASP7P55210 303 aa5.1□□□□□ -1.59
ATM-228ENST00000639240 ANKRD39Q53RE8 183 aa5.1□□□□□ -1.59
ATM-228ENST00000639240 NOL9Q5SY16 702 aaKnown RBP5.1□□□□□ -1.59
ATM-228ENST00000639240 DACT3Q96B18 629 aaPredicted RBP5.1□□□□□ -1.59
ATM-228ENST00000639240 FCRL2Q96LA5 508 aaPredicted RBP5.1□□□□□ -1.59
ATM-228ENST00000639240 DSCC1Q9BVC3 393 aa5.1□□□□□ -1.59
ATM-228ENST00000639240 AP5S1Q9NUS5 200 aa5.1□□□□□ -1.59
ATM-228ENST00000639240 ZNF451Q9Y4E5 1061 aa5.1□□□□□ -1.59
ATM-228ENST00000639240 HRKO00198 91 aa5.09□□□□□ -1.59
ATM-228ENST00000639240 SMAD7O15105 426 aaKnown RBP5.09□□□□□ -1.59
ATM-228ENST00000639240 FGRP09769 529 aa5.09□□□□□ -1.59
ATM-228ENST00000639240 MSL3P1P0C860 447 aa5.09□□□□□ -1.59
ATM-228ENST00000639240 CD247P20963 164 aa5.09□□□□□ -1.59
ATM-228ENST00000639240 BMP8BP34820 402 aa5.09□□□□□ -1.59
ATM-228ENST00000639240 ETFBP38117 255 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms