RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 PTPN21Q16825 1174 aa18.91■□□□□ 0.62
HNRNPU-217ENST00000638952 CCDC13Q8IYE1 715 aa18.91■□□□□ 0.62
HNRNPU-217ENST00000638952 ARHGEF10LQ9HCE6 1279 aa18.91■□□□□ 0.62
HNRNPU-217ENST00000638952 A0A087WWV3 80 aa18.91■□□□□ 0.62
HNRNPU-217ENST00000638952 SPATA1Q5VX52 437 aa18.91■□□□□ 0.62
HNRNPU-217ENST00000638952 TTLL7Q6ZT98 887 aa18.91■□□□□ 0.62
HNRNPU-217ENST00000638952 TTC19Q6DKK2 380 aaPredicted RBP18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 EFCAB13Q8IY85 973 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 EFCC1Q9HA90 598 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 TNKSO95271 1327 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 RPN1P04843 607 aaKnown RBP18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 CASC4Q6P4E1 433 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 PPP4R1Q8TF05 950 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 MED4Q9NPJ6 270 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 CARMIL3Q8ND23 1372 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 USP17L12C9JPN9 530 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 USP17L21D6R901 530 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 PTPROQ16827 1216 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 DDX17Q92841 729 aaKnown RBP18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 SPDL1Q96EA4 605 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 KCNK3O14649 394 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 GNA14O95837 355 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 BCRP11274 1271 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 CUL4BQ13620 913 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 HAUS8Q9BT25 410 aa18.9■□□□□ 0.62
HNRNPU-217ENST00000638952 A0A1W2PQ27 194 aa18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 A0A1W2PQ64 194 aa18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 A0A1W2PQD8 194 aa18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 MYCLP12524 364 aaPredicted RBP18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 POLE2P56282 527 aa18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 STRN3Q13033 797 aa18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 PRPF31Q8WWY3 499 aaKnown RBP18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 GPKOWQ92917 476 aaPredicted RBP eCLIP18.89■□□□□ 0.621e-6■□□□□ 9.1
HNRNPU-217ENST00000638952 ATP2A3Q93084 1043 aa18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 TRIM6Q9C030 488 aaPredicted RBP18.89■□□□□ 0.62
HNRNPU-217ENST00000638952 B4DLN1 442 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 ATP10AO60312 1499 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 M0R2C6 588 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 GTPBP6O43824 516 aaPredicted RBP18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 DNM2P50570 870 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 CUL4AQ13619 759 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 PDE11AQ9HCR9 933 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 AMFRQ9UKV5 643 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 ZC4H2Q9NQZ6 224 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 ZBTB12Q9Y330 459 aaPredicted RBP18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 PROSER3Q2NL68 480 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 DPCR1Q3MIW9 517 aa18.89■□□□□ 0.61
HNRNPU-217ENST00000638952 RNF8O76064 485 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 APOEP02649 317 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 PHKG2P15735 406 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 GPBP1Q86WP2 473 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 FTOQ9C0B1 505 aaKnown RBP eCLIP18.88■□□□□ 0.617e-8■■■■□ 22.1
HNRNPU-217ENST00000638952 PDCD2Q16342 344 aaPredicted RBP18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 NXNQ6DKJ4 435 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 MYOCDQ8IZQ8 938 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 NSUN7Q8NE18 718 aaKnown RBP18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 HINFPQ9BQA5 517 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 DBNLQ9UJU6 430 aaKnown RBP18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 CCNL1Q9UK58 526 aaPredicted RBP18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 CASP14P31944 242 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 RPS6KA2Q15349 733 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 DAPK3O43293 454 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 BCAMP50895 628 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 NT5C3AQ9H0P0 336 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 PCDHB13Q9Y5F0 798 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 TTC37Q6PGP7 1564 aa18.88■□□□□ 0.61
HNRNPU-217ENST00000638952 H7C1D1 291 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 CLASP1Q7Z460 1538 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 ABCB4P21439 1286 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 RDH13Q8NBN7 331 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 FBXO18Q8NFZ0 1043 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 FRMPD2Q68DX3 1309 aaPredicted RBP18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 LARGE1O95461 756 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 IFT88Q13099 833 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 JPH2Q9BR39 696 aaPredicted RBP18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 CYP21A2P08686 494 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 CACTINQ8WUQ7 758 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 MLH3Q9UHC1 1453 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 KDM3AQ9Y4C1 1321 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 KRIT1O00522 736 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 KRT3P12035 628 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 SCG2P13521 617 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 ADORA1P30542 326 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 CTAGE3PQ8IX95 158 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 SIRT2Q8IXJ6 389 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 N4BP2L2Q92802 583 aaPredicted RBP18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 NCAPGQ9BPX3 1015 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 HAUS4Q9H6D7 363 aa18.87■□□□□ 0.61
HNRNPU-217ENST00000638952 TPH2Q8IWU9 490 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 TCP10Q12799 353 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 CCDC89Q8N998 374 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 CFBP00751 764 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 GYG1P46976 350 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 PROCA1Q8NCQ7 364 aaPredicted RBP18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 SEPT8Q92599 483 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 ANKFY1Q9P2R3 1169 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 MAST3O60307 1309 aa18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 CFAP65Q6ZU64 1925 aaKnown RBP18.86■□□□□ 0.61
HNRNPU-217ENST00000638952 PPP6R2O75170 966 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms