RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 CHMP4CQ96CF2 233 aa17.05■□□□□ 0.32
KCNMA1-239ENST00000638531 DEFB118Q96PH6 123 aa17.05■□□□□ 0.32
KCNMA1-239ENST00000638531 CRISPLD2Q9H0B8 497 aa17.05■□□□□ 0.32
KCNMA1-239ENST00000638531 RANBP17Q9H2T7 1088 aaKnown RBP17.05■□□□□ 0.32
KCNMA1-239ENST00000638531 ANO2Q9NQ90 1003 aa17.05■□□□□ 0.32
KCNMA1-239ENST00000638531 FBXO40Q9UH90 709 aa17.05■□□□□ 0.32
KCNMA1-239ENST00000638531 RIPK3Q9Y572 518 aa17.05■□□□□ 0.32
KCNMA1-239ENST00000638531 TKFCQ3LXA3 575 aa17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 HABP4Q5JVS0 413 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 TTBK2Q6IQ55 1244 aa17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 CYB5R4Q7L1T6 521 aa17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 MAML3Q96JK9 1138 aa17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 GPCPD1Q9NPB8 672 aa17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 DIS3Q9Y2L1 958 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 BAZ2BQ9UIF8 2168 aaKnown RBP17.04■□□□□ 0.32
KCNMA1-239ENST00000638531 IFIT1BQ5T764 474 aaKnown RBP17.03■□□□□ 0.32
KCNMA1-239ENST00000638531 MB21D2Q8IYB1 491 aaPredicted RBP17.03■□□□□ 0.32
KCNMA1-239ENST00000638531 ACAD9Q9H845 621 aa17.03■□□□□ 0.32
KCNMA1-239ENST00000638531 DNAJC25-GNG10A0A024R161 153 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 SLC27A2O14975 620 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 ICAM1P05362 532 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 CYBAP13498 195 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 SLC16A2P36021 539 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 NECTIN1Q15223 517 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 ZNF792Q3KQV3 632 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 ASPRV1Q53RT3 343 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 UBE2Q1Q7Z7E8 422 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 RNF146Q9NTX7 359 aa17.02■□□□□ 0.32
KCNMA1-239ENST00000638531 WDR19Q8NEZ3 1342 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 FARP2O94887 1054 aaPredicted RBP17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 PGK2P07205 417 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 CCND3P30281 292 aaPredicted RBP17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 CYP2C19P33261 490 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 SLC4A3P48751 1232 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 SART3Q15020 963 aaKnown RBP17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 CREB3L3Q68CJ9 461 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 CCDC174Q6PII3 467 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 ANKLE1Q8NAG6 615 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 DDX11Q96FC9 970 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 AGBL1Q96MI9 1066 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 MTA3Q9BTC8 594 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 PNMA2Q9UL42 364 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 CCPG1Q9ULG6 757 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 KIAA1217Q5T5P2 1943 aa17.01■□□□□ 0.31
KCNMA1-239ENST00000638531 ERICH2A1L162 156 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 ALAS1P13196 640 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 ANTXR2P58335 489 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 SNAP25P60880 206 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 ZNF467Q7Z7K2 595 aaPredicted RBP17■□□□□ 0.31
KCNMA1-239ENST00000638531 ANKRD35Q8N283 1001 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
KCNMA1-239ENST00000638531 HOMER2Q9NSB8 354 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 NRBP1Q9UHY1 535 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 OGDHLQ9ULD0 1010 aa17■□□□□ 0.31
KCNMA1-239ENST00000638531 PFASO15067 1338 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 IFIT3O14879 490 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 MSCO60682 206 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 TFRCP02786 760 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 PARP1P09874 1014 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 GOLGA8HP0CJ92 632 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 WTAPQ15007 396 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 RNF20Q5VTR2 975 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 TRPV1Q8NER1 839 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 TRERF1Q96PN7 1200 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 TINF2Q9BSI4 451 aa16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 A1CFQ9NQ94 594 aaKnown RBP16.99■□□□□ 0.31
KCNMA1-239ENST00000638531 SYNGAP1Q96PV0 1343 aa16.98■□□□□ 0.31
KCNMA1-239ENST00000638531 LHX8Q68G74 356 aa16.98■□□□□ 0.31
KCNMA1-239ENST00000638531 MAMDC4Q6UXC1 1216 aa16.98■□□□□ 0.31
KCNMA1-239ENST00000638531 FGD4Q96M96 766 aa16.98■□□□□ 0.31
KCNMA1-239ENST00000638531 DDX20Q9UHI6 824 aaKnown RBP16.98■□□□□ 0.31
KCNMA1-239ENST00000638531 CEP290O15078 2479 aa16.98■□□□□ 0.31
KCNMA1-239ENST00000638531 SEPT4O43236 478 aa16.97■□□□□ 0.31
KCNMA1-239ENST00000638531 MCM5P33992 734 aa16.97■□□□□ 0.31
KCNMA1-239ENST00000638531 MUM1L1Q5H9M0 696 aa16.97■□□□□ 0.31
KCNMA1-239ENST00000638531 TMEM67Q5HYA8 995 aa16.97■□□□□ 0.31
KCNMA1-239ENST00000638531 FAM133AQ8N9E0 248 aa16.97■□□□□ 0.31
KCNMA1-239ENST00000638531 CPVLQ9H3G5 476 aa16.97■□□□□ 0.31
KCNMA1-239ENST00000638531 POTEB2H3BUK9 544 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 PRC1O43663 620 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 TAL1P17542 331 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 GRM4Q14833 912 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 CDC37Q16543 378 aaPredicted RBP16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 CHST3Q7LGC8 479 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 IGDCC4Q8TDY8 1250 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 TMEM87BQ96K49 555 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 UBA5Q9GZZ9 404 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 LY9Q9HBG7 655 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 SENP2Q9HC62 589 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 CYP39A1Q9NYL5 469 aa16.96■□□□□ 0.31
KCNMA1-239ENST00000638531 PALM3A6NDB9 673 aaPredicted RBP16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 CNGA1P29973 690 aa16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 MNX1P50219 401 aaPredicted RBP16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 TROAPQ12815 778 aa16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 TSGA10IPQ3SY00 556 aa16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 NECAB2Q7Z6G3 386 aa16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 ADGRF4Q8IZF3 695 aa16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 HTATIP2Q9BUP3 242 aa16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 MAD2L2Q9UI95 211 aa16.95■□□□□ 0.3
KCNMA1-239ENST00000638531 CNPY2Q9Y2B0 182 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms