RNA–Protein interactions for RNA: ENST00000638086.1

GRAMD1B-215, Transcript of GRAM domain containing 1B, humanhuman

TSL 5 BASIC

Gene GRAMD1B, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1B-215ENST00000638086 NIM1KQ8IY84 436 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 RNF26Q9BY78 433 aaPredicted RBP14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 GOLPH3LQ9H4A5 285 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 PPP1R1BQ9UD71 204 aaPredicted RBP14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 COL2A1P02458 1487 aaPredicted RBP14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 PLEKHA8P1O95397 391 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 RBM5P52756 815 aaKnown RBP eCLIP14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 CACNB3P54284 484 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 KIF23Q02241 960 aaPredicted RBP14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 CFAP100Q494V2 611 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 JAKMIP3Q5VZ66 844 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 ZFPM1Q8IX07 1006 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 EFCAB13Q8IY85 973 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 TRIM22Q8IYM9 498 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 CEP89Q96ST8 783 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 EHD4Q9H223 541 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 SERPINB13Q9UIV8 391 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 FAN1Q9Y2M0 1017 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 CNTNAP5Q8WYK1 1306 aa14.29□□□□□ -0.12
GRAMD1B-215ENST00000638086 KIF28PB7ZC32 967 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 DEXIO95424 95 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 MAP2K2P36507 400 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 MAP3K9P80192 1104 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 ZRSR1Q15695 479 aaKnown RBP14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 KRT40Q6A162 431 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 PNMA1Q8ND90 353 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 WASF1Q92558 559 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 GOLGA1Q92805 767 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 MAP3K14Q99558 947 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 KAT14Q9H8E8 782 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 CFAP45Q9UL16 551 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 N4BP1O75113 896 aaKnown RBP14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 BRD3Q15059 726 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 LRRC31Q6UY01 552 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 TADA2BQ86TJ2 420 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 ANKRD20A12PQ8NF67 263 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 SWAP70Q9UH65 585 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 SUFUQ9UMX1 484 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 MRFAP1Q9Y605 127 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 LTBP3Q9NS15 1303 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 ATRNL1Q5VV63 1379 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 SHMT1P34896 483 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 TXLNAP40222 546 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 PRMT6Q96LA8 375 aaPredicted RBP14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 PLEKHA4Q9H4M7 779 aa14.28□□□□□ -0.12
GRAMD1B-215ENST00000638086 IGKV6D-41A0A0C4DH26 115 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 ATL3Q6DD88 541 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 SH3BP5LQ7L8J4 393 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 BRAPQ7Z569 592 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 POTEDQ86YR6 584 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 MICALL1Q8N3F8 863 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 CCDC82Q8N4S0 544 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 CTCFLQ8NI51 663 aaPredicted RBP14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 TMEM47Q9BQJ4 181 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 DNAJC18Q9H819 358 aa14.27□□□□□ -0.12
GRAMD1B-215ENST00000638086 VWA3AA6NCI4 1184 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 SPDYE2BA6NHP3 402 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 HLA-DOAP06340 250 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 SPDYE6P0CI01 402 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 GNG11P61952 73 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 GRM4Q14833 912 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 PKN1Q16512 942 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 SRBD1Q8N5C6 995 aaKnown RBP14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 CEP95Q96GE4 821 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 WDR24Q96S15 920 aa14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 DHX36Q9H2U1 1008 aaKnown RBP14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 TDRD3Q9H7E2 651 aaKnown RBP14.27□□□□□ -0.13
GRAMD1B-215ENST00000638086 DDTLA6NHG4 134 aaPredicted RBP14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 PRPF3O43395 683 aaKnown RBP14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 EIF3JO75822 258 aaKnown RBP14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 CXCL9Q07325 125 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 TCP10Q12799 353 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 HDXQ7Z353 690 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 AGBL3Q8NEM8 1001 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 NLGN2Q8NFZ4 835 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 SHISA4Q96DD7 197 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 USP28Q96RU2 1077 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 FTOQ9C0B1 505 aaKnown RBP eCLIP14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 ZBTB12Q9Y330 459 aaPredicted RBP14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 DICER1Q9UPY3 1922 aaKnown RBP14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 ZSCAN12O43309 604 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 KIF1CO43896 1103 aaKnown RBP14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 AKR1B1P15121 316 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 STX8Q9UNK0 236 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 BCS1LQ9Y276 419 aa14.26□□□□□ -0.13
GRAMD1B-215ENST00000638086 A0A087WUV0 522 aaPredicted RBP14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 ENTPD3O75355 529 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 KIF5BP33176 963 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 DPCR1Q3MIW9 517 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 BEND6Q5SZJ8 279 aaPredicted RBP14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 ZNF396Q96N95 335 aaPredicted RBP14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 TAOK2Q9UL54 1235 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 MMP1P03956 469 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 TRIM29Q14134 588 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 MYSM1Q5VVJ2 828 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 CNPY4Q8N129 248 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 CNNM3Q8NE01 707 aa14.25□□□□□ -0.13
GRAMD1B-215ENST00000638086 ZSWIM4Q9H7M6 989 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms