RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PDHBP11177 359 aa20.89■□□□□ 0.93
PNKP-230ENST00000638016 OAZ1P54368 228 aa20.89■□□□□ 0.93
PNKP-230ENST00000638016 MUM1L1Q5H9M0 696 aa20.89■□□□□ 0.93
PNKP-230ENST00000638016 DCAF4Q8WV16 495 aa20.89■□□□□ 0.93
PNKP-230ENST00000638016 SENP6Q9GZR1 1112 aaPredicted RBP20.89■□□□□ 0.93
PNKP-230ENST00000638016 RNF146Q9NTX7 359 aa20.89■□□□□ 0.93
PNKP-230ENST00000638016 DIS3Q9Y2L1 958 aaKnown RBP20.89■□□□□ 0.93
PNKP-230ENST00000638016 DDX49Q9Y6V7 483 aaKnown RBP20.89■□□□□ 0.93
PNKP-230ENST00000638016 DNAH12Q6ZR08 3092 aa20.88■□□□□ 0.93
PNKP-230ENST00000638016 SNAI1O95863 264 aaPredicted RBP20.88■□□□□ 0.93
PNKP-230ENST00000638016 ZNF865P0CJ78 1059 aaPredicted RBP20.88■□□□□ 0.93
PNKP-230ENST00000638016 ALAS1P13196 640 aa20.88■□□□□ 0.93
PNKP-230ENST00000638016 CHMLP26374 656 aa20.88■□□□□ 0.93
PNKP-230ENST00000638016 ATN1P54259 1190 aaPredicted RBP20.88■□□□□ 0.93
PNKP-230ENST00000638016 CNTN2Q02246 1040 aa20.88■□□□□ 0.93
PNKP-230ENST00000638016 ANKRD35Q8N283 1001 aa20.88■□□□□ 0.93
PNKP-230ENST00000638016 CHST13Q8NET6 341 aa20.88■□□□□ 0.93
PNKP-230ENST00000638016 ESR2Q92731 530 aa20.88■□□□□ 0.93
PNKP-230ENST00000638016 RNF41Q9H4P4 317 aaPredicted RBP20.88■□□□□ 0.93
PNKP-230ENST00000638016 PLA2G6O60733 806 aa20.87■□□□□ 0.93
PNKP-230ENST00000638016 PCP11498 1178 aaKnown RBP20.87■□□□□ 0.93
PNKP-230ENST00000638016 PTH1RQ03431 593 aa20.87■□□□□ 0.93
PNKP-230ENST00000638016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.87■□□□□ 0.93
PNKP-230ENST00000638016 PRO3102Q9H379 93 aa20.87■□□□□ 0.93
PNKP-230ENST00000638016 CPVLQ9H3G5 476 aa20.87■□□□□ 0.93
PNKP-230ENST00000638016 ACAD9Q9H845 621 aa20.87■□□□□ 0.93
PNKP-230ENST00000638016 A1CFQ9NQ94 594 aaKnown RBP20.87■□□□□ 0.93
PNKP-230ENST00000638016 DNM1LO00429 736 aa20.86■□□□□ 0.93
PNKP-230ENST00000638016 GOLGA8HP0CJ92 632 aa20.86■□□□□ 0.93
PNKP-230ENST00000638016 IMMTQ16891 758 aaKnown RBP20.86■□□□□ 0.93
PNKP-230ENST00000638016 SYDE2Q5VT97 1194 aa20.86■□□□□ 0.93
PNKP-230ENST00000638016 TRERF1Q96PN7 1200 aa20.86■□□□□ 0.93
PNKP-230ENST00000638016 PURBQ96QR8 312 aaKnown RBP20.86■□□□□ 0.93
PNKP-230ENST00000638016 TAF6LQ9Y6J9 622 aa20.86■□□□□ 0.93
PNKP-230ENST00000638016 ASTN1O14525 1302 aa20.85■□□□□ 0.93
PNKP-230ENST00000638016 PGK1P00558 417 aa20.85■□□□□ 0.93
PNKP-230ENST00000638016 FXR1P51114 621 aaKnown RBP eCLIP20.85■□□□□ 0.93
PNKP-230ENST00000638016 IRX5P78411 483 aaPredicted RBP20.85■□□□□ 0.93
PNKP-230ENST00000638016 ZNF543Q08ER8 600 aa20.85■□□□□ 0.93
PNKP-230ENST00000638016 LRRC41Q15345 812 aa20.85■□□□□ 0.93
PNKP-230ENST00000638016 RANBP17Q9H2T7 1088 aaKnown RBP20.85■□□□□ 0.93
PNKP-230ENST00000638016 ZSWIM5Q9P217 1185 aa20.85■□□□□ 0.93
PNKP-230ENST00000638016 FBXO40Q9UH90 709 aa20.85■□□□□ 0.93
PNKP-230ENST00000638016 ZHX1Q9UKY1 873 aaPredicted RBP20.85■□□□□ 0.93
PNKP-230ENST00000638016 CCPG1Q9ULG6 757 aa20.85■□□□□ 0.93
PNKP-230ENST00000638016 LAMA3Q16787 3333 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 ADCY6O43306 1168 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 SNHG28P0DPA3 235 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 FDX1P10109 184 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 MAMDC4Q6UXC1 1216 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 BTNL9Q6UXG8 535 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 FAM133AQ8N9E0 248 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 FERMT2Q96AC1 680 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 XPNPEP3Q9NQH7 507 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.84■□□□□ 0.93
PNKP-230ENST00000638016 CNPY2Q9Y2B0 182 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 LRRC37A2A6NM11 1700 aa20.84■□□□□ 0.93
PNKP-230ENST00000638016 RAD50Q92878 1312 aa20.83■□□□□ 0.93
PNKP-230ENST00000638016 SYNGAP1Q96PV0 1343 aa20.83■□□□□ 0.93
PNKP-230ENST00000638016 SOWAHBA6NEL2 793 aa20.83■□□□□ 0.93
PNKP-230ENST00000638016 ICAM1P05362 532 aa20.83■□□□□ 0.93
PNKP-230ENST00000638016 ARMCX2Q7L311 632 aa20.83■□□□□ 0.93
PNKP-230ENST00000638016 ENAHQ8N8S7 591 aaPredicted RBP20.83■□□□□ 0.93
PNKP-230ENST00000638016 TTC14Q96N46 770 aa20.83■□□□□ 0.93
PNKP-230ENST00000638016 NRBP1Q9UHY1 535 aa20.83■□□□□ 0.93
PNKP-230ENST00000638016 TNKSO95271 1327 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 KBTBD13C9JR72 458 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 POTEB2H3BUK9 544 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 NFIBO00712 420 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 RARBP10826 455 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 PTGS1P23219 599 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 ADCYAP1R1P41586 468 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 NSMFQ6X4W1 530 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 CYB5R4Q7L1T6 521 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 ZNF467Q7Z7K2 595 aaPredicted RBP20.82■□□□□ 0.92
PNKP-230ENST00000638016 CCDC144CPQ8IYA2 1237 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 ARRDC4Q8NCT1 418 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 PNMA1Q8ND90 353 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
PNKP-230ENST00000638016 UBA5Q9GZZ9 404 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 CTNNA3Q9UI47 895 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 SZT2Q5T011 3432 aa20.82■□□□□ 0.92
PNKP-230ENST00000638016 MYADML2A6NDP7 307 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 SGSM2O43147 1006 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 CYP21A2P08686 494 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 AKR1A1P14550 325 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 TKFCQ3LXA3 575 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 IQCA1Q86XH1 822 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 DGKHQ86XP1 1220 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 MSL3Q8N5Y2 521 aaKnown RBP20.81■□□□□ 0.92
PNKP-230ENST00000638016 KATNBL1Q9H079 304 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 CYP39A1Q9NYL5 469 aa20.81■□□□□ 0.92
PNKP-230ENST00000638016 ADAMTS4O75173 837 aa20.8■□□□□ 0.92
PNKP-230ENST00000638016 MAGEA10P43363 369 aaPredicted RBP20.8■□□□□ 0.92
PNKP-230ENST00000638016 RTP1P59025 263 aa20.8■□□□□ 0.92
PNKP-230ENST00000638016 ACVR2BQ13705 512 aa20.8■□□□□ 0.92
PNKP-230ENST00000638016 STOX1Q6ZVD7 989 aa20.8■□□□□ 0.92
PNKP-230ENST00000638016 GDF15Q99988 308 aa20.8■□□□□ 0.92
PNKP-230ENST00000638016 SYNRGQ9UMZ2 1314 aa20.79■□□□□ 0.92
PNKP-230ENST00000638016 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms