RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TFAP4Q01664 338 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 MYL5Q02045 173 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 EXOC7Q9UPT5 735 aa18.64■□□□□ 0.57
CACNA1A-253ENST00000637927 PLEKHG3A1L390 1219 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 PEX19P40855 299 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 LRRC23Q53EV4 343 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 CCDC93Q567U6 631 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 CCDC127Q96BQ5 260 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 COG4Q9H9E3 785 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 CCDC87Q9NVE4 849 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 ESRRBO95718 433 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 C19orf44Q9H6X5 657 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 SNX14Q9Y5W7 946 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 KIAA0825Q8IV33 1275 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 SOX5P35711 763 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 SOS1Q07889 1333 aaPredicted RBP18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 EYA2O00167 538 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 HLA-DPA1P20036 260 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 KCNQ4P56696 695 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 DCPSQ96C86 337 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 CFAP36Q96G28 342 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 LRWD1Q9UFC0 647 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 NDUFAB1O14561 156 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 N4BP1O75113 896 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 ADCY8P40145 1251 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 C1orf228Q6PIY5 440 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 DNAJC10Q8IXB1 793 aa18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 RNF10Q8N5U6 811 aaKnown RBP18.63■□□□□ 0.57
CACNA1A-253ENST00000637927 H7C0C1 242 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 ATP5OP48047 213 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 SNAP25P60880 206 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 IRX4P78413 519 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 UBE3AQ05086 875 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 IP6K1Q92551 441 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 EIF4G3O43432 1585 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 GYG1P46976 350 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 CYP26C1Q6V0L0 522 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 RSRC2Q7L4I2 434 aaKnown RBP18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 CCNYQ8ND76 341 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 GABPB2Q8TAK5 448 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 A0A1W2PP64 1363 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 MAP3K19Q56UN5 1328 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 ABTB1Q969K4 478 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 HAUS2Q9NVX0 235 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 FAM95CA0A1B0GW59 222 aa18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 GADD45BO75293 160 aaPredicted RBP18.62■□□□□ 0.57
CACNA1A-253ENST00000637927 RRAGAQ7L523 313 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 DIS3L2Q8IYB7 885 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 IFT122Q9HBG6 1241 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 WDR91A4D1P6 747 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 PPFIA2O75334 1257 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 CDC37L1Q7L3B6 337 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 RFX6Q8HWS3 928 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 CNGA4Q8IV77 575 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 SH3TC1Q8TE82 1336 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 CAVIN2O95810 425 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 MTX1Q13505 466 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 CEP128Q6ZU80 1094 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 GPKOWQ92917 476 aaPredicted RBP eCLIP18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 AFF4Q9UHB7 1163 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 SEPT9Q9UHD8 586 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 XKR9Q5GH70 373 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 MIER3Q7Z3K6 550 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 HACE1Q8IYU2 909 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 SLC4A7Q9Y6M7 1214 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 K7ENM7 598 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 RPSAP08865 295 aaKnown RBP18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 PIP4K2CQ8TBX8 421 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 NAPGQ99747 312 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 USP19O94966 1318 aa18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 ZNF608Q9ULD9 1512 aaPredicted RBP18.61■□□□□ 0.57
CACNA1A-253ENST00000637927 DCAF4L1Q3SXM0 396 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 NLRX1Q86UT6 975 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 C11orf74Q86VG3 221 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 PNMA6EA0A0J9YXQ4 647 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 EEF1B2P24534 225 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 ANKRD20A3Q5VUR7 823 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 SLF1Q9BQI6 1058 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 PPWD1Q96BP3 646 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 DCTPP1Q9H773 170 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 ANGEL1Q9UNK9 670 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 SGK1O00141 431 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 RAB20Q9NX57 234 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 FANCCQ00597 558 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 DAB2P98082 770 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 POLA2Q14181 598 aa18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 SF3B3Q15393 1217 aaKnown RBP18.6■□□□□ 0.57
CACNA1A-253ENST00000637927 H3BRJ5 948 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 HDXQ7Z353 690 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 PEX26Q7Z412 305 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 TRIM59Q8IWR1 403 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 FAM71BQ8TC56 605 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 RAD18Q9NS91 495 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 ACTN4O43707 911 aaKnown RBP18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 HADHAP40939 763 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 BTN2A2Q8WVV5 523 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 MAP3K1Q13233 1512 aa18.59■□□□□ 0.57
CACNA1A-253ENST00000637927 SMCO2A6NFE2 343 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms