RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 ATP2A1O14983 1001 aa16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 CCND3P30281 292 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 WTAPQ15007 396 aa16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 GPATCH4Q5T3I0 446 aaKnown RBP16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 CHST13Q8NET6 341 aa16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 ACAD9Q9H845 621 aa16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 PAK6Q9NQU5 681 aaPredicted RBP16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 PDE4DIPQ5VU43 2346 aa16.86■□□□□ 0.29
CACNA1A-249ENST00000637777 FARP2O94887 1054 aaPredicted RBP16.85■□□□□ 0.29
CACNA1A-249ENST00000637777 PARP1P09874 1014 aaKnown RBP16.85■□□□□ 0.29
CACNA1A-249ENST00000637777 TMEM67Q5HYA8 995 aa16.85■□□□□ 0.29
CACNA1A-249ENST00000637777 CREB3L3Q68CJ9 461 aa16.85■□□□□ 0.29
CACNA1A-249ENST00000637777 SHISA4Q96DD7 197 aa16.85■□□□□ 0.29
CACNA1A-249ENST00000637777 TRERF1Q96PN7 1200 aa16.85■□□□□ 0.29
CACNA1A-249ENST00000637777 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
CACNA1A-249ENST00000637777 SLC27A2O14975 620 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 TKFCQ3LXA3 575 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 ASPRV1Q53RT3 343 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 OLFML2BQ68BL8 750 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 STOX1Q6ZVD7 989 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 MAML3Q96JK9 1138 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 UBA5Q9GZZ9 404 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 MYH6P13533 1939 aa16.84■□□□□ 0.29
CACNA1A-249ENST00000637777 MYCNP04198 464 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 ICAM1P05362 532 aa16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 TAL1P17542 331 aaPredicted RBP16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 MAP3K21Q5TCX8 1036 aa16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 BTNL9Q6UXG8 535 aa16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 NSMFQ6X4W1 530 aa16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 NFXL1Q6ZNB6 911 aa16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 RANBP17Q9H2T7 1088 aaKnown RBP16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 CPVLQ9H3G5 476 aa16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 VAT1LQ9HCJ6 419 aa16.83■□□□□ 0.28
CACNA1A-249ENST00000637777 ZNF536O15090 1300 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 POTEB2H3BUK9 544 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 SNHG28P0DPA3 235 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 MCM5P33992 734 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 USH1GQ495M9 461 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 CATIPQ7Z7H3 387 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 NUP133Q8WUM0 1156 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 ANKS1AQ92625 1134 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 CNPY2Q9Y2B0 182 aa16.82■□□□□ 0.28
CACNA1A-249ENST00000637777 PFASO15067 1338 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 PRC1O43663 620 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 SEC23AQ15436 765 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 CDC37Q16543 378 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 ZNF792Q3KQV3 632 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 PRAMEF19Q5SWL8 479 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 ANO1Q5XXA6 986 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 MB21D2Q8IYB1 491 aaPredicted RBP16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 DPF3Q92784 378 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 TINF2Q9BSI4 451 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 HTATIP2Q9BUP3 242 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 DDX20Q9UHI6 824 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 PNMA2Q9UL42 364 aa16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 DIS3Q9Y2L1 958 aaKnown RBP16.81■□□□□ 0.28
CACNA1A-249ENST00000637777 PTPDC1A2A3K4 754 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 CCDC69A6NI79 296 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 MSCO60682 206 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 CYBAP13498 195 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 CAPN2P17655 700 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 NECTIN1Q15223 517 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 MUM1L1Q5H9M0 696 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 A1CFQ9NQ94 594 aaKnown RBP16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 ZHX1Q9UKY1 873 aaPredicted RBP16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 SMCHD1A6NHR9 2005 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 MCM3APO60318 1980 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
CACNA1A-249ENST00000637777 REC8O95072 547 aa16.79■□□□□ 0.28
CACNA1A-249ENST00000637777 NECAB2Q7Z6G3 386 aa16.79■□□□□ 0.28
CACNA1A-249ENST00000637777 ADGRF4Q8IZF3 695 aa16.79■□□□□ 0.28
CACNA1A-249ENST00000637777 TRPV1Q8NER1 839 aa16.79■□□□□ 0.28
CACNA1A-249ENST00000637777 PAWRQ96IZ0 340 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-249ENST00000637777 CRISPLD2Q9H0B8 497 aa16.79■□□□□ 0.28
CACNA1A-249ENST00000637777 MKI67P46013 3256 aaKnown RBP16.79■□□□□ 0.28
CACNA1A-249ENST00000637777 KLRF2D3W0D1 207 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 ANTXR2P58335 489 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 FGD1P98174 961 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 HOMER1Q86YM7 354 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 STAG2Q8N3U4 1231 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 ANKLE1Q8NAG6 615 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 CTCFLQ8NI51 663 aaPredicted RBP16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 DIS3LQ8TF46 1054 aaKnown RBP16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 TMEM87BQ96K49 555 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 NEK1Q96PY6 1258 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 LRRC2Q9BYS8 371 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 SENP2Q9HC62 589 aa16.78■□□□□ 0.28
CACNA1A-249ENST00000637777 TNRC18O15417 2968 aaPredicted RBP16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 WDR19Q8NEZ3 1342 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 DNAJC25-GNG10A0A024R161 153 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 NFIBO00712 420 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 SEPT4O43236 478 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 CALML3P27482 149 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 CNTN2Q02246 1040 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 KRT32Q14532 448 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 GRM4Q14833 912 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 FBXO11Q86XK2 927 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 ZNF654Q8IZM8 581 aa16.77■□□□□ 0.28
CACNA1A-249ENST00000637777 MSL3Q8N5Y2 521 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms