RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CNNM2Q9H8M5 875 aa16.22■□□□□ 0.19
PNKP-228ENST00000637325 MYCNP04198 464 aaPredicted RBP16.21■□□□□ 0.19
PNKP-228ENST00000637325 ALAS1P13196 640 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 SLC16A2P36021 539 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 MNX1P50219 401 aaPredicted RBP16.21■□□□□ 0.19
PNKP-228ENST00000637325 SYDE2Q5VT97 1194 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 ANO1Q5XXA6 986 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 ARRDC4Q8NCT1 418 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 TRERF1Q96PN7 1200 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 KAT14Q9H8E8 782 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 RNF146Q9NTX7 359 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 ZSWIM5Q9P217 1185 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 NRBP1Q9UHY1 535 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 CCPG1Q9ULG6 757 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 CNPY2Q9Y2B0 182 aa16.21■□□□□ 0.19
PNKP-228ENST00000637325 TRIOBPQ9H2D6 2365 aa16.2■□□□□ 0.18
PNKP-228ENST00000637325 PDHBP11177 359 aa16.2■□□□□ 0.18
PNKP-228ENST00000637325 TRDNQ13061 729 aa16.2■□□□□ 0.18
PNKP-228ENST00000637325 BTNL9Q6UXG8 535 aa16.2■□□□□ 0.18
PNKP-228ENST00000637325 MSL3Q8N5Y2 521 aaKnown RBP16.2■□□□□ 0.18
PNKP-228ENST00000637325 ZSCAN10Q96SZ4 725 aaPredicted RBP16.2■□□□□ 0.18
PNKP-228ENST00000637325 UBAC1Q9BSL1 405 aa16.2■□□□□ 0.18
PNKP-228ENST00000637325 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
PNKP-228ENST00000637325 ZNF536O15090 1300 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 BAZ2BQ9UIF8 2168 aaKnown RBP16.19■□□□□ 0.18
PNKP-228ENST00000637325 DNAJC25-GNG10A0A024R161 153 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 POTEB2H3BUK9 544 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 SGSM2O43147 1006 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 PTH1RQ03431 593 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 ZNF543Q08ER8 600 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 GJC2Q5T442 439 aaPredicted RBP16.19■□□□□ 0.18
PNKP-228ENST00000637325 KIAA1211Q6ZU35 1233 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.19■□□□□ 0.18
PNKP-228ENST00000637325 C7orf61Q8IZ16 206 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 PNMA1Q8ND90 353 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 SENP6Q9GZR1 1112 aaPredicted RBP16.19■□□□□ 0.18
PNKP-228ENST00000637325 RANBP17Q9H2T7 1088 aaKnown RBP16.19■□□□□ 0.18
PNKP-228ENST00000637325 SYNGAP1Q96PV0 1343 aa16.19■□□□□ 0.18
PNKP-228ENST00000637325 KBTBD13C9JR72 458 aa16.18■□□□□ 0.18
PNKP-228ENST00000637325 DNM1LO00429 736 aa16.18■□□□□ 0.18
PNKP-228ENST00000637325 RARBP10826 455 aa16.18■□□□□ 0.18
PNKP-228ENST00000637325 GPATCH4Q5T3I0 446 aaKnown RBP16.18■□□□□ 0.18
PNKP-228ENST00000637325 ZNF467Q7Z7K2 595 aaPredicted RBP16.18■□□□□ 0.18
PNKP-228ENST00000637325 ZHX1Q9UKY1 873 aaPredicted RBP16.18■□□□□ 0.18
PNKP-228ENST00000637325 PFASO15067 1338 aa16.18■□□□□ 0.18
PNKP-228ENST00000637325 TNKSO95271 1327 aa16.18■□□□□ 0.18
PNKP-228ENST00000637325 ICAM1P05362 532 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 GOLGA8HP0CJ92 632 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 COL6A1P12109 1028 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 AKR1A1P14550 325 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 TAL1P17542 331 aaPredicted RBP16.17■□□□□ 0.18
PNKP-228ENST00000637325 IFIT1BQ5T764 474 aaKnown RBP16.17■□□□□ 0.18
PNKP-228ENST00000637325 MAMDC4Q6UXC1 1216 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 CHRDL2Q6WN34 429 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 ENAHQ8N8S7 591 aaPredicted RBP16.17■□□□□ 0.18
PNKP-228ENST00000637325 ANKS1AQ92625 1134 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 A1CFQ9NQ94 594 aaKnown RBP16.17■□□□□ 0.18
PNKP-228ENST00000637325 PNMA2Q9UL42 364 aa16.17■□□□□ 0.18
PNKP-228ENST00000637325 COLQQ9Y215 455 aaPredicted RBP16.17■□□□□ 0.18
PNKP-228ENST00000637325 LCTP09848 1927 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 SNAI1O95863 264 aaPredicted RBP16.16■□□□□ 0.18
PNKP-228ENST00000637325 CYP21A2P08686 494 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 ZNF865P0CJ78 1059 aaPredicted RBP16.16■□□□□ 0.18
PNKP-228ENST00000637325 SNHG28P0DPA3 235 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 CNTN2Q02246 1040 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 MUM1L1Q5H9M0 696 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 NSMFQ6X4W1 530 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 RALYLQ86SE5 291 aaKnown RBP16.16■□□□□ 0.18
PNKP-228ENST00000637325 XPNPEP3Q9NQH7 507 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.16■□□□□ 0.18
PNKP-228ENST00000637325 FAM184BQ9ULE4 1060 aa16.16■□□□□ 0.18
PNKP-228ENST00000637325 ERICH2A1L162 156 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 ACVR2BQ13705 512 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 LRRC41Q15345 812 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 ASPRV1Q53RT3 343 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 HABP4Q5JVS0 413 aaKnown RBP16.15■□□□□ 0.18
PNKP-228ENST00000637325 ARMCX2Q7L311 632 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 FAM133AQ8N9E0 248 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 NCOA7Q8NI08 942 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 CCDC136Q96JN2 1154 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 UBA5Q9GZZ9 404 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 CYP39A1Q9NYL5 469 aa16.15■□□□□ 0.18
PNKP-228ENST00000637325 ZMYND8Q9ULU4 1186 aaPredicted RBP16.15■□□□□ 0.18
PNKP-228ENST00000637325 ASB14A6NK59 587 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 DHX16O60231 1041 aaKnown RBP16.14■□□□□ 0.17
PNKP-228ENST00000637325 NEFLP07196 543 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
PNKP-228ENST00000637325 ATN1P54259 1190 aaPredicted RBP16.14■□□□□ 0.17
PNKP-228ENST00000637325 LRRC26Q2I0M4 334 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 CYB5R4Q7L1T6 521 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 RNF180Q86T96 592 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 SKAP1Q86WV1 359 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 CCDC144CPQ8IYA2 1237 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 MAP4K1Q92918 833 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 FGD4Q96M96 766 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 RBM8AQ9Y5S9 174 aaKnown RBP16.14■□□□□ 0.17
PNKP-228ENST00000637325 DNAH12Q6ZR08 3092 aa16.14■□□□□ 0.17
PNKP-228ENST00000637325 PTPDC1A2A3K4 754 aa16.13■□□□□ 0.17
PNKP-228ENST00000637325 SOWAHBA6NEL2 793 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms