RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 JMYQ8N9B5 988 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 GMCL1P1Q8NEA9 526 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 FBXO28Q9NVF7 368 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 TRPM7Q96QT4 1865 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 CTAGE5O15320 804 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 RESTQ13127 1097 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 MTMR2Q13614 643 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 EARS2Q5JPH6 523 aaKnown RBP9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 GPKOWQ92917 476 aaPredicted RBP eCLIP9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 ZNF830Q96NB3 372 aaPredicted RBP9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 MAP3K14Q99558 947 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 NAT10Q9H0A0 1025 aaKnown RBP9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 PRDM4Q9UKN5 801 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 KCNJ14Q9UNX9 436 aa9.41□□□□□ -0.9
CACNA1A-232ENST00000636966 PITPNM1O00562 1244 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 KIF3CO14782 793 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 RAD21O60216 631 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 ASNSP08243 561 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 NT5C2P49902 561 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 USP28Q96RU2 1077 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 NOL7Q9UMY1 257 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 AFG3L2Q9Y4W6 797 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 ZNF236Q9UL36 1845 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 TRIM75PA6NK02 468 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 USP17L10C9JJH3 530 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 PEX10O60683 326 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 NR1I2O75469 434 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 SSRP1Q08945 709 aaKnown RBP9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 SPP2Q13103 211 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 ADGRF4Q8IZF3 695 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 SPDYE1Q8NFV5 336 aaPredicted RBP9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 OXER1Q8TDS5 423 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 JMJD4Q9H9V9 463 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 ZHX2Q9Y6X8 837 aa9.4□□□□□ -0.9
CACNA1A-232ENST00000636966 TPM3P06753 285 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 FAM83BQ5T0W9 1011 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 SLFN13Q68D06 897 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 ATL3Q6DD88 541 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 LUZP1Q86V48 1076 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 WASF1Q92558 559 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 FTOQ9C0B1 505 aaKnown RBP eCLIP9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 DNAJC25Q9H1X3 360 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 CLSTN2Q9H4D0 955 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 RIOX1Q9H6W3 641 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 VPS54Q9P1Q0 977 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 MYH6P13533 1939 aa9.4□□□□□ -0.91
CACNA1A-232ENST00000636966 WNT7AO00755 349 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 MOGSQ13724 837 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 PIGSQ96S52 555 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 ZNF408Q9H9D4 720 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 VAT1LQ9HCJ6 419 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 CABP5Q9NP86 173 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 CCDC196A0A1B0GTZ2 297 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 IRF6O14896 467 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 PARP1P09874 1014 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 XBP1P17861 261 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 SUPT20HL1Q3ZLR7 823 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 NOL9Q5SY16 702 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 LDHDQ86WU2 507 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 CEP57L1Q8IYX8 460 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 FBXO18Q8NFZ0 1043 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 CTCFLQ8NI51 663 aaPredicted RBP9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 KCNG4Q8TDN1 519 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 MRPS27Q92552 414 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 MTMR8Q96EF0 704 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 FAM205CA6NFA0 338 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 PRPF3O43395 683 aaKnown RBP9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 NRDCO43847 1150 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 CALM1P0DP23 149 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 CALM2P0DP24 149 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 CALM3P0DP25 149 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 LDLRAD1Q5T700 205 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 WWC2Q6AWC2 1192 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 VCPKMTQ9H867 229 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 TTC12Q9H892 705 aaPredicted RBP9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 ELP3Q9H9T3 547 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 TCHHQ07283 1943 aa9.39□□□□□ -0.91
CACNA1A-232ENST00000636966 SPTLC2O15270 562 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 SLC1A4P43007 532 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 DCAF15Q66K64 600 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 BRAPQ7Z569 592 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 P2RX7Q99572 595 aaKnown RBP9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 RNF26Q9BY78 433 aaPredicted RBP9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 ANO10Q9NW15 660 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 STK36Q9NRP7 1315 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 VCAM1P19320 739 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 HMGCS2P54868 508 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 MAP3K9P80192 1104 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 NR5A1Q13285 461 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 CCDC178Q5BJE1 867 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 TREML2Q5T2D2 321 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 HOMER1Q86YM7 354 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 RBM28Q9NW13 759 aaKnown RBP9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 OPLAHO14841 1288 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 MARCKSP29966 332 aaPredicted RBP9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 BACE1P56817 501 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 STX1AQ16623 288 aa9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 PFKFB3Q16875 520 aaPredicted RBP9.38□□□□□ -0.91
CACNA1A-232ENST00000636966 CCDC34Q96HJ3 373 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms