RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 TTLL1O95922 423 aa13.06□□□□□ -0.32
CLN6-217ENST00000636964 HDLBPQ00341 1268 aaKnown RBP13.06□□□□□ -0.32
CLN6-217ENST00000636964 DPCR1Q3MIW9 517 aa13.06□□□□□ -0.32
CLN6-217ENST00000636964 TTBK2Q6IQ55 1244 aa13.06□□□□□ -0.32
CLN6-217ENST00000636964 ZNF513Q8N8E2 541 aaPredicted RBP13.06□□□□□ -0.32
CLN6-217ENST00000636964 CCDC112Q8NEF3 446 aa13.06□□□□□ -0.32
CLN6-217ENST00000636964 BARHL2Q9NY43 387 aa13.06□□□□□ -0.32
CLN6-217ENST00000636964 PI4KBQ9UBF8 816 aa13.06□□□□□ -0.32
CLN6-217ENST00000636964 PCDHA4Q9UN74 947 aa13.06□□□□□ -0.32
CLN6-217ENST00000636964 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 SLC16A2P36021 539 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 NAPAP54920 295 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 CERKLQ49MI3 558 aaPredicted RBP13.05□□□□□ -0.32
CLN6-217ENST00000636964 IDI2Q9BXS1 227 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 ANO10Q9NW15 660 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 VWA3AA6NCI4 1184 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 CALML3P27482 149 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 NOVP48745 357 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 ELF2Q15723 593 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 KCTD1Q719H9 257 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 GRAMD1CQ8IYS0 662 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 LRRN4CLQ8ND94 238 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 ZNF397Q8NF99 534 aaPredicted RBP13.05□□□□□ -0.32
CLN6-217ENST00000636964 RRP36Q96EU6 259 aaKnown RBP13.05□□□□□ -0.32
CLN6-217ENST00000636964 SPZ1Q9BXG8 430 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 CEP83Q9Y592 693 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 IQCB1Q15051 598 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 CT47A1Q5JQC4 288 aaPredicted RBP13.05□□□□□ -0.32
CLN6-217ENST00000636964 RSBN1LQ6PCB5 846 aaPredicted RBP13.05□□□□□ -0.32
CLN6-217ENST00000636964 LZTS2Q9BRK4 669 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 SERTAD1Q9UHV2 236 aa13.05□□□□□ -0.32
CLN6-217ENST00000636964 SCAF8Q9UPN6 1271 aaKnown RBP13.05□□□□□ -0.32
CLN6-217ENST00000636964 MYH8P13535 1937 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 COL4A5P29400 1685 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 CCDC66A2RUB6 948 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 INF2Q27J81 1249 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 KRBA2Q6ZNG9 492 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 METTL16Q86W50 562 aaKnown RBP13.04□□□□□ -0.32
CLN6-217ENST00000636964 COA7Q96BR5 231 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 DHX36Q9H2U1 1008 aaKnown RBP13.04□□□□□ -0.32
CLN6-217ENST00000636964 SH3GLB2Q9NR46 395 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 SEC63Q9UGP8 760 aaKnown RBP13.04□□□□□ -0.32
CLN6-217ENST00000636964 PCDHA6Q9UN73 950 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 PCDHA8Q9Y5H6 950 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 CCDC194A0A1B0GVG4 234 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 BECN2A8MW95 431 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 ZNF75DP51815 510 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 HNRNPH2P55795 449 aaKnown RBP13.04□□□□□ -0.32
CLN6-217ENST00000636964 SEPT2Q15019 361 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 FOXP4Q8IVH2 680 aaPredicted RBP13.04□□□□□ -0.32
CLN6-217ENST00000636964 AOPEPQ8N6M6 819 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 PIM2Q9P1W9 311 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
CLN6-217ENST00000636964 FAM237AA0A1B0GTK4 181 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 SMCO2A6NFE2 343 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 GOLGA6L6A8MZA4 724 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 GOLGA6L19H0YKK7 550 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 R3HDM1Q15032 1099 aaKnown RBP13.03□□□□□ -0.32
CLN6-217ENST00000636964 TRIM5Q9C035 493 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 PLIN4Q96Q06 1357 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 A0A087X0B3 334 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 EEF2P13639 858 aaKnown RBP13.03□□□□□ -0.32
CLN6-217ENST00000636964 CYP2C19P33261 490 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 CEP135Q66GS9 1140 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 CSRNP1Q96S65 589 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 EHD4Q9H223 541 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 FEZ2Q9UHY8 353 aaPredicted RBP13.03□□□□□ -0.32
CLN6-217ENST00000636964 CDC25AP30304 524 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 JAG1P78504 1218 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 NYAP1Q6ZVC0 841 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 DHX40Q8IX18 779 aaKnown RBP13.03□□□□□ -0.32
CLN6-217ENST00000636964 CEP57L1Q8IYX8 460 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 OGFOD1Q8N543 542 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 SYMPKQ92797 1274 aaKnown RBP13.03□□□□□ -0.32
CLN6-217ENST00000636964 DHX58Q96C10 678 aa13.03□□□□□ -0.32
CLN6-217ENST00000636964 VIL1P09327 827 aaKnown RBP13.02□□□□□ -0.32
CLN6-217ENST00000636964 DLGAP5Q15398 846 aa13.02□□□□□ -0.32
CLN6-217ENST00000636964 IL17AQ16552 155 aa13.02□□□□□ -0.32
CLN6-217ENST00000636964 TPD52L1Q16890 204 aaPredicted RBP13.02□□□□□ -0.32
CLN6-217ENST00000636964 VEZTQ9HBM0 779 aa13.02□□□□□ -0.32
CLN6-217ENST00000636964 BIN2Q9UBW5 565 aaPredicted RBP13.02□□□□□ -0.32
CLN6-217ENST00000636964 PCDHA5Q9Y5H7 936 aa13.02□□□□□ -0.32
CLN6-217ENST00000636964 M0R2N6 131 aa13.02□□□□□ -0.33
CLN6-217ENST00000636964 ZNF543Q08ER8 600 aa13.02□□□□□ -0.33
CLN6-217ENST00000636964 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.33
CLN6-217ENST00000636964 JAKMIP3Q5VZ66 844 aa13.02□□□□□ -0.33
CLN6-217ENST00000636964 NIM1KQ8IY84 436 aa13.02□□□□□ -0.33
CLN6-217ENST00000636964 ZNF579Q8NAF0 562 aaKnown RBP13.02□□□□□ -0.33
CLN6-217ENST00000636964 CCDC17Q96LX7 622 aa13.02□□□□□ -0.33
CLN6-217ENST00000636964 MYCBPQ99417 103 aaPredicted RBP13.02□□□□□ -0.33
CLN6-217ENST00000636964 RIOX1Q9H6W3 641 aa13.02□□□□□ -0.33
CLN6-217ENST00000636964 ZNF646O15015 1829 aaPredicted RBP13.02□□□□□ -0.33
CLN6-217ENST00000636964 SHTN1A0MZ66 631 aa13.01□□□□□ -0.33
CLN6-217ENST00000636964 SPDYE2BA6NHP3 402 aa13.01□□□□□ -0.33
CLN6-217ENST00000636964 SPDYE6P0CI01 402 aa13.01□□□□□ -0.33
CLN6-217ENST00000636964 POLD1P28340 1107 aa13.01□□□□□ -0.33
CLN6-217ENST00000636964 ATP2C1P98194 919 aaPredicted RBP13.01□□□□□ -0.33
CLN6-217ENST00000636964 NBPF9Q3BBW0 867 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms