RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CYTH3O43739 400 aa18.58■□□□□ 0.56
CLN6-216ENST00000636876 LARGE1O95461 756 aa18.58■□□□□ 0.56
CLN6-216ENST00000636876 ME3Q16798 604 aa18.58■□□□□ 0.56
CLN6-216ENST00000636876 MTMR8Q96EF0 704 aa18.58■□□□□ 0.56
CLN6-216ENST00000636876 SLKQ9H2G2 1235 aaPredicted RBP18.58■□□□□ 0.56
CLN6-216ENST00000636876 VAT1LQ9HCJ6 419 aa18.58■□□□□ 0.56
CLN6-216ENST00000636876 ATP2A1O14983 1001 aa18.57■□□□□ 0.56
CLN6-216ENST00000636876 CD2BP2O95400 341 aaKnown RBP18.57■□□□□ 0.56
CLN6-216ENST00000636876 OAZ1P54368 228 aa18.57■□□□□ 0.56
CLN6-216ENST00000636876 FUT2Q10981 343 aa18.57■□□□□ 0.56
CLN6-216ENST00000636876 CDC37Q16543 378 aaPredicted RBP18.57■□□□□ 0.56
CLN6-216ENST00000636876 Q3C1V9 767 aa18.57■□□□□ 0.56
CLN6-216ENST00000636876 CCDC174Q6PII3 467 aa18.57■□□□□ 0.56
CLN6-216ENST00000636876 CMTR1Q8N1G2 835 aaKnown RBP18.57■□□□□ 0.56
CLN6-216ENST00000636876 ZSCAN31Q96LW9 406 aaPredicted RBP18.57■□□□□ 0.56
CLN6-216ENST00000636876 SPATC1LQ9H0A9 340 aa18.57■□□□□ 0.56
CLN6-216ENST00000636876 RAVER2Q9HCJ3 691 aaKnown RBP18.57■□□□□ 0.56
CLN6-216ENST00000636876 ZNF536O15090 1300 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 CNTNAP5Q8WYK1 1306 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 STAT3P40763 770 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 MCM2P49736 904 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 CCNA1P78396 465 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 SP3Q02447 781 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 SCRN1Q12765 414 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 PLS1Q14651 629 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 CPXCR1Q8N123 301 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 CCDC82Q8N4S0 544 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 MOV10L1Q9BXT6 1211 aaKnown RBP18.56■□□□□ 0.56
CLN6-216ENST00000636876 TEX13BQ9BXU2 312 aa18.56■□□□□ 0.56
CLN6-216ENST00000636876 ICAM1P05362 532 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 NTRK3Q16288 839 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 QRICH1Q2TAL8 776 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 SNRNP48Q6IEG0 339 aaKnown RBP18.55■□□□□ 0.56
CLN6-216ENST00000636876 RIOX2Q8IUF8 465 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 NECAB1Q8N987 351 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 GTF3C6Q969F1 213 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
CLN6-216ENST00000636876 AGBL1Q96MI9 1066 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 PIGSQ96S52 555 aa18.55■□□□□ 0.56
CLN6-216ENST00000636876 SH2B1Q9NRF2 756 aaPredicted RBP18.55■□□□□ 0.56
CLN6-216ENST00000636876 CPLX1O14810 134 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 ZBTB5O15062 677 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 FKTNO75072 461 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 IFNAR1P17181 557 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 CPLX2Q6PUV4 134 aaKnown RBP18.54■□□□□ 0.56
CLN6-216ENST00000636876 HOMER1Q86YM7 354 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 SHCBP1Q8NEM2 672 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 ZNF296Q8WUU4 475 aaPredicted RBP18.54■□□□□ 0.56
CLN6-216ENST00000636876 PIBF1Q8WXW3 757 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 PORCNQ9H237 461 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 PNMA2Q9UL42 364 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 CCPG1Q9ULG6 757 aa18.54■□□□□ 0.56
CLN6-216ENST00000636876 MYH6P13533 1939 aa18.53■□□□□ 0.56
CLN6-216ENST00000636876 PNMA6FA0A0J9YX94 578 aa18.53■□□□□ 0.56
CLN6-216ENST00000636876 SLC25A27O95847 323 aa18.53■□□□□ 0.56
CLN6-216ENST00000636876 COPB2P35606 906 aa18.53■□□□□ 0.56
CLN6-216ENST00000636876 LACTBP83111 547 aaPredicted RBP18.53■□□□□ 0.56
CLN6-216ENST00000636876 FBXO11Q86XK2 927 aa18.53■□□□□ 0.56
CLN6-216ENST00000636876 SEC63Q9UGP8 760 aaKnown RBP18.53■□□□□ 0.56
CLN6-216ENST00000636876 hCG_1642624A0A1W2PR95 340 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 PPP1R11O60927 126 aaPredicted RBP18.52■□□□□ 0.56
CLN6-216ENST00000636876 MAPK4P31152 587 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 SLC4A3P48751 1232 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 ST3GAL1Q11201 340 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 TKFCQ3LXA3 575 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 NCAPG2Q86XI2 1143 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 PHKBQ93100 1093 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 TMX3Q96JJ7 454 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 EFCC1Q9HA90 598 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 RIPK3Q9Y572 518 aa18.52■□□□□ 0.56
CLN6-216ENST00000636876 V9GY48 417 aaPredicted RBP18.52■□□□□ 0.56
CLN6-216ENST00000636876 SMCHD1A6NHR9 2005 aa18.52■□□□□ 0.55
CLN6-216ENST00000636876 CDKL5O76039 1030 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 ALAS1P13196 640 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 TAL1P17542 331 aaPredicted RBP18.51■□□□□ 0.55
CLN6-216ENST00000636876 ERCC3P19447 782 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 KIF22Q14807 665 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 USH1GQ495M9 461 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 CCDC83Q8IWF9 413 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 CCAR1Q8IX12 1150 aaKnown RBP18.51■□□□□ 0.55
CLN6-216ENST00000636876 CD99L2Q8TCZ2 262 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 ERO1AQ96HE7 468 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 AMNQ9BXJ7 453 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 SLC26A6Q9BXS9 759 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 RNF26Q9BY78 433 aaPredicted RBP18.51■□□□□ 0.55
CLN6-216ENST00000636876 MROH8Q9H579 483 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 RNF146Q9NTX7 359 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 RBM27Q9P2N5 1060 aaKnown RBP18.51■□□□□ 0.55
CLN6-216ENST00000636876 PDE4DIPQ5VU43 2346 aa18.51■□□□□ 0.55
CLN6-216ENST00000636876 CCDC85CA6NKD9 419 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 PRPF3O43395 683 aaKnown RBP18.5■□□□□ 0.55
CLN6-216ENST00000636876 FMNL1O95466 1100 aaPredicted RBP18.5■□□□□ 0.55
CLN6-216ENST00000636876 CTDNEP1O95476 244 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 CTGFP29279 349 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 PSMC4P43686 418 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 AKAP17AQ02040 695 aaKnown RBP18.5■□□□□ 0.55
CLN6-216ENST00000636876 TRAF1Q13077 416 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 TRIM22Q8IYM9 498 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 CHST13Q8NET6 341 aa18.5■□□□□ 0.55
CLN6-216ENST00000636876 SNX21Q969T3 373 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms