RNA–Protein interactions for RNA: ENST00000636640.1

SYNGAP1-216, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 118 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-216ENST00000636640 ZMYM1Q5SVZ6 1142 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 MFSD14CQ5VZR4 134 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLFN13Q68D06 897 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 KRT40Q6A162 431 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SNRNP48Q6IEG0 339 aaKnown RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCSAPQ6IQ19 270 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 RCSD1Q6JBY9 416 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 B4GALNT3Q6L9W6 998 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TAPT1Q6NXT6 567 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCDC174Q6PII3 467 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMEM179Q6ZVK1 233 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 KCTD1Q719H9 257 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 EEPD1Q7L9B9 569 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMCO2Q7Z6W1 182 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 DPP9Q86TI2 863 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZNF589Q86UQ0 364 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ERC1Q8IUD2 1116 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 RIOX2Q8IUF8 465 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TBC1D10CQ8IV04 446 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CCDC144CPQ8IYA2 1237 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 IFNL3Q8IZI9 196 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TDHQ8IZJ6 230 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CLASRPQ8N2M8 674 aaKnown RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 KBTBD3Q8NAB2 608 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ANKLE1Q8NAG6 615 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SLC17A8Q8NDX2 589 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SHCBP1Q8NEM2 672 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 KLHDC9Q8NEP7 349 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 EXOC6Q8TAG9 804 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SOCS4Q8WXH5 440 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 LPAR1Q92633 364 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 COPS5Q92905 334 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZFP91Q96JP5 570 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 YTHDC1Q96MU7 727 aaKnown RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 MMP19Q99542 508 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CDX2Q99626 313 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ZKSCAN3Q9BRR0 538 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TINF2Q9BSI4 451 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 COL25A1Q9BXS0 654 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TRIM34Q9BYJ4 488 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 TBC1D2Q9BYX2 928 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 LRRCC1Q9C099 1032 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 BCAS3Q9H6U6 928 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 SENP2Q9HC62 589 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CABP5Q9NP86 173 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 PRDM5Q9NQX1 630 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 HOMER2Q9NSB8 354 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ATP8A2Q9NTI2 1148 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 ECHDC1Q9NTX5 307 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CDKN2AIPQ9NXV6 580 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 MTMR4Q9NYA4 1195 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 CXXC1Q9P0U4 656 aaPredicted RBP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 NYAP2Q9P242 653 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 PPP1R9AQ9ULJ8 1098 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 DDX19BQ9UMR2 479 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 PHF24Q9UPV7 400 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 HDAC5Q9UQL6 1122 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 NR2E3Q9Y5X4 410 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 XIRP2A4UGR9 3374 aa1.93□□□□□ -2.1
SYNGAP1-216ENST00000636640 NEDD4P46934 1319 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 FRMPD2Q68DX3 1309 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TP53BP1Q12888 1972 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 KIAA1549LQ6ZVL6 1849 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PATJQ8NI35 1801 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ANAPC1Q9H1A4 1944 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 EPOPA6NHQ4 379 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PATL2C9JE40 543 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TMEM232C9JQI7 657 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 KBTBD13C9JR72 458 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 DNM1LO00429 736 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 NFIBO00712 420 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 OPLAHO14841 1288 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 KIAA0355O15063 1070 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ADAMTS3O15072 1205 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 STRNO43815 780 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PQBP1O60828 265 aaKnown RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PPP1R11O60927 126 aaPredicted RBP1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 DTNBO60941 627 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ARIH2O95376 493 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CD4P01730 458 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 FGAP02671 866 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 APPP05067 770 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ASGR1P07306 291 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 GOLGA8HP0CJ92 632 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CYP2C9P11712 490 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 FCER1AP12319 257 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 BMP3P12645 472 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ALAS1P13196 640 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CSF2RAP15509 400 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 SMPD1P17405 629 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 MX1P20591 662 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 NOVP48745 357 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 TDO2P48775 406 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 CDK7P50613 346 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 ACLYP53396 1101 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 RABGGTBP53611 331 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 USP14P54578 494 aa1.92□□□□□ -2.1
SYNGAP1-216ENST00000636640 PDE1AP54750 535 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms