RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RNF168Q8IYW5 571 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 MGARPQ8TDB4 240 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 SPATA17Q96L03 361 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 PPP1R9AQ9ULJ8 1098 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 FARP1Q9Y4F1 1045 aaPredicted RBP6.07□□□□□ -1.44
SCN1A-209ENST00000635750 MAD1L1Q9Y6D9 718 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 MROH5Q6ZUA9 1318 aa6.07□□□□□ -1.44
SCN1A-209ENST00000635750 K7ENM7 598 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ZNF263O14978 683 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 TRIM37O94972 964 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 BAG2O95816 211 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SLC4A1P02730 911 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 NNMTP40261 264 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 KLC3Q6P597 504 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 PDXDC1Q6P996 788 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 LINS1Q8NG48 757 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CEP19Q96LK0 163 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 TEKT3Q9BXF9 490 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 USP21Q9UK80 565 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 PPIP5K1Q6PFW1 1433 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 H7C0C1 242 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ATP5OP48047 213 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CYP2J2P51589 502 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ATP8B2P98198 1209 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 AOC3Q16853 763 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SZRD1Q7Z422 152 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 RDH13Q8NBN7 331 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 NACC1Q96RE7 527 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 POLR3CQ9BUI4 534 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 EFHD1Q9BUP0 239 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ATP8A2Q9NTI2 1148 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 USP40Q9NVE5 1235 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 KLHL14Q9P2G3 628 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CC2D2AQ9P2K1 1620 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SH3TC1Q8TE82 1336 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CUL7Q14999 1698 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 B4E1Z4 1266 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ZNF467Q7Z7K2 595 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 TADA2BQ86TJ2 420 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 TGFBRAP1Q8WUH2 860 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SNX19Q92543 992 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 FAM81BQ96LP2 452 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 BICC1Q9H694 974 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ANGEL1Q9UNK9 670 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 KDRP35968 1356 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 IQGAP2Q13576 1575 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 PPP1R12AO14974 1030 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 DDX5P17844 614 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 INPP5BP32019 993 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 MIS18BP1Q6P0N0 1132 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SYT10Q6XYQ8 523 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CABP7Q86V35 215 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 PIDD1Q9HB75 910 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SUGT1Q9Y2Z0 365 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CUTAO60888 179 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CLNS1AP54105 237 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 LRMPQ12912 555 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 GLE1Q53GS7 698 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ANGPTL8Q6UXH0 198 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 DYMQ7RTS9 669 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ENOX1Q8TC92 643 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CFAP36Q96G28 342 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 TCEANC2Q96MN5 208 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 EDEM3Q9BZQ6 932 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SUDS3Q9H7L9 328 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ARMT1Q9H993 441 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ABCF3Q9NUQ8 709 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 HPCAL4Q9UM19 191 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 POLIQ9UNA4 740 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 MAPK8IP1Q9UQF2 711 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 RALGAPBQ86X10 1494 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 SART1O43290 800 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 MED7O43513 233 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 BRD1O95696 1058 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 CHEK2O96017 543 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 INHBAP08476 426 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 PDE1AP54750 535 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 BFSP1Q12934 665 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 FRA10AC1Q70Z53 315 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 PATL1Q86TB9 770 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 KLHL7Q8IXQ5 586 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 RPGRIP1Q96KN7 1286 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 LLPHQ9BRT6 129 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 FTOQ9C0B1 505 aaKnown RBP eCLIP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 V9GY48 417 aaPredicted RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 MAP3K5Q99683 1374 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ARHGEF11O15085 1522 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ARPP19P56211 112 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 BPIFB4P59827 614 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 KAZNQ674X7 775 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ARHGAP45Q92619 1136 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 PPWD1Q96BP3 646 aaKnown RBP6.06□□□□□ -1.44
SCN1A-209ENST00000635750 MTRQ99707 1265 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 TBC1D2Q9BYX2 928 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 C19orf44Q9H6X5 657 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 KCNH3Q9ULD8 1083 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 STK38LQ9Y2H1 464 aa6.06□□□□□ -1.44
SCN1A-209ENST00000635750 ESRRBO95718 433 aa6.05□□□□□ -1.44
SCN1A-209ENST00000635750 MAP3K7CLP57077 242 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms