RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 CHST13Q8NET6 341 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 FBXO40Q9UH90 709 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 MAD2L2Q9UI95 211 aa17.21■□□□□ 0.35
CDC42BPB-209ENST00000634889 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 KLRF2D3W0D1 207 aa17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 HOXC6P09630 235 aa17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 ADORA2AP29274 412 aa17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 ZNF333Q96JL9 665 aa17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 GPHNQ9NQX3 736 aaPredicted RBP17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 SLC5A4Q9NY91 659 aa17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 RIPK3Q9Y572 518 aa17.2■□□□□ 0.34
CDC42BPB-209ENST00000634889 CASTP20810 708 aaKnown RBP17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 KIF5BP33176 963 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 KCTD2Q14681 263 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 C8orf34Q49A92 452 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 CCDC174Q6PII3 467 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 ADGRF4Q8IZF3 695 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 STAG2Q8N3U4 1231 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 FBXL16Q8N461 479 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 CTCFLQ8NI51 663 aaPredicted RBP17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 AGBL1Q96MI9 1066 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 MMP19Q99542 508 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 LRRC2Q9BYS8 371 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 TM6SF1Q9BZW5 370 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 UBA5Q9GZZ9 404 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 CCPG1Q9ULG6 757 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 SLC12A7Q9Y666 1083 aa17.19■□□□□ 0.34
CDC42BPB-209ENST00000634889 HMGCRP04035 888 aa17.18■□□□□ 0.34
CDC42BPB-209ENST00000634889 CYP2B6P20813 491 aa17.18■□□□□ 0.34
CDC42BPB-209ENST00000634889 RPS6KB1P23443 525 aa17.18■□□□□ 0.34
CDC42BPB-209ENST00000634889 ANAPC15P60006 121 aa17.18■□□□□ 0.34
CDC42BPB-209ENST00000634889 SNAP25P60880 206 aa17.18■□□□□ 0.34
CDC42BPB-209ENST00000634889 SH3TC2Q8TF17 1288 aa17.18■□□□□ 0.34
CDC42BPB-209ENST00000634889 ACAD9Q9H845 621 aa17.18■□□□□ 0.34
CDC42BPB-209ENST00000634889 ELNP15502 786 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 RCAN1P53805 252 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 UBXN2AP68543 259 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 FGD1P98174 961 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 CDC37Q16543 378 aaPredicted RBP17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 APOA5Q6Q788 366 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 SYNE3Q6ZMZ3 975 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 RUFY3Q7L099 469 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 DPP9Q86TI2 863 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 NUP133Q8WUM0 1156 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 TRIB2Q92519 343 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 TCEANC2Q96MN5 208 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 CPVLQ9H3G5 476 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 ZSWIM6Q9HCJ5 1215 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 HOMER2Q9NSB8 354 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 RNF146Q9NTX7 359 aa17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 RBBP6Q7Z6E9 1792 aaKnown RBP17.17■□□□□ 0.34
CDC42BPB-209ENST00000634889 ZNFX1Q9P2E3 1918 aaKnown RBP17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 DHX16O60231 1041 aaKnown RBP17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 ALAS1P13196 640 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 CPA1P15085 419 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 SMARCA1P28370 1054 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 SLC4A3P48751 1232 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 GNAQP50148 359 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 MTMR8Q96EF0 704 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 IL17RAQ96F46 866 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 TRERF1Q96PN7 1200 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 LZTS2Q9BRK4 669 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 MYL10Q9BUA6 226 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 AGXT2Q9BYV1 514 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 RIOX1Q9H6W3 641 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 JMJD4Q9H9V9 463 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 BIN2Q9UBW5 565 aaPredicted RBP17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 DIS3Q9Y2L1 958 aaKnown RBP17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 PFASO15067 1338 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 PLXNA1Q9UIW2 1896 aa17.16■□□□□ 0.34
CDC42BPB-209ENST00000634889 DNAJC25-GNG10A0A024R161 153 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 CCDC85CA6NKD9 419 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 COBLO75128 1261 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 SEC24BO95487 1268 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 INHAP05111 366 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 OLFML2BQ68BL8 750 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 Q6ZUG5 572 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 ANKRD35Q8N283 1001 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 FANCBQ8NB91 859 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 NPLOC4Q8TAT6 608 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 DDX11Q96FC9 970 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 SPZ1Q9BXG8 430 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 CYP46A1Q9Y6A2 500 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 MYH6P13533 1939 aa17.15■□□□□ 0.34
CDC42BPB-209ENST00000634889 ZBTB5O15062 677 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 ZBTB43O43298 467 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 IGHA2P01877 340 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 TRAF1Q13077 416 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 CCL14Q16627 93 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 QRICH1Q2TAL8 776 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 ZNF792Q3KQV3 632 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 MICU3Q86XE3 530 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 MAF1Q9H063 256 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 A1CFQ9NQ94 594 aaKnown RBP17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 BRPF3Q9ULD4 1205 aa17.14■□□□□ 0.33
CDC42BPB-209ENST00000634889 KLF18A0A0U1RQI7 1052 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 CYTH3O43739 400 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 PGK2P07205 417 aa17.13■□□□□ 0.33
CDC42BPB-209ENST00000634889 PPP2R5BQ15173 497 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms