RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 DDX11Q96FC9 970 aa10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 AGBL1Q96MI9 1066 aa10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 TEX13BQ9BXU2 312 aa10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 IL25Q9H293 177 aa10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 SLC38A10Q9HBR0 1119 aa10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 ZNF287Q9HBT7 754 aa10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 DAXXQ9UER7 740 aaPredicted RBP10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 DIS3Q9Y2L1 958 aaKnown RBP10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 CTDP1Q9Y5B0 961 aaPredicted RBP10.68□□□□□ -0.7
SPTAN1-219ENST00000629378 DNAJC25-GNG10A0A024R161 153 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 TSPY2A6NKD2 308 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 EPB41L2O43491 1005 aaKnown RBP10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 RANBP6O60518 1105 aaKnown RBP10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 FGAP02671 866 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 SLC3A2P08195 630 aaKnown RBP10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 TICAM2Q86XR7 235 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 FGD4Q96M96 766 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 KIF2CQ99661 725 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 XPNPEP3Q9NQH7 507 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 DDX49Q9Y6V7 483 aaKnown RBP10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 LAMA2P24043 3122 aaKnown RBP10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 LTBP2Q14767 1821 aa10.67□□□□□ -0.7
SPTAN1-219ENST00000629378 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 ZNF536O15090 1300 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 TRIM43BA6NCK2 446 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 ATP2A1O14983 1001 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 ADCY6O43306 1168 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 RARBP10826 455 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 COPB2P35606 906 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 HAND2P61296 217 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 CNTN2Q02246 1040 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 BECN1Q14457 450 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 MCMDC2Q4G0Z9 681 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 RRP12Q5JTH9 1297 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 TTBK2Q6IQ55 1244 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 CCDC174Q6PII3 467 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 ZNF589Q86UQ0 364 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 ANKRD35Q8N283 1001 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 STAG1Q8WVM7 1258 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 TRIM43Q96BQ3 446 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 LBHD1Q9BQE6 289 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 LSG1Q9H089 658 aaKnown RBP10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 PRDM5Q9NQX1 630 aaPredicted RBP10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 HELLSQ9NRZ9 838 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 STX8Q9UNK0 236 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 COL6A3P12111 3177 aa10.66□□□□□ -0.7
SPTAN1-219ENST00000629378 RAD50Q92878 1312 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 MYADML2A6NDP7 307 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 ADAMTS4O75173 837 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 HSPD1P10809 573 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 PTGS1P23219 599 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 ITGB8P26012 769 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 SLC16A2P36021 539 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 SLC1A4P43007 532 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 TLE2Q04725 743 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 IKQ13123 557 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 ACVR2BQ13705 512 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 ALX1Q15699 326 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 LRIT3Q3SXY7 679 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 MUM1L1Q5H9M0 696 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 RCSD1Q6JBY9 416 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 MAMDC4Q6UXC1 1216 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 DEFB123Q8N688 67 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 BADQ92934 168 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 GMCL1Q96IK5 515 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 PURBQ96QR8 312 aaKnown RBP10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 TOMM22Q9NS69 142 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 NRBP1Q9UHY1 535 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 ANAPC4Q9UJX5 808 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 ZHX1Q9UKY1 873 aaPredicted RBP10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 PHF24Q9UPV7 400 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 CNPY2Q9Y2B0 182 aa10.65□□□□□ -0.7
SPTAN1-219ENST00000629378 SYNRGQ9UMZ2 1314 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 A0A1W2PQ45 241 aaPredicted RBP10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 A0A1W2PQY0 241 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 SOWAHBA6NEL2 793 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 ORC4O43929 436 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 FGRP09769 529 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 ALAS1P13196 640 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 AKR1A1P14550 325 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 STAT2P52630 851 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 PTH1RQ03431 593 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 SNX17Q15036 470 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 RABEP1Q15276 862 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 SHHQ15465 462 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 KCNA10Q16322 511 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 CCDC144BQ3MJ40 725 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 C9orf50Q5SZB4 431 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 RNF180Q86T96 592 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 CCDC144CPQ8IYA2 1237 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 CHST13Q8NET6 341 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 CHURC1Q8WUH1 139 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 TRERF1Q96PN7 1200 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 PDLIM7Q9NR12 457 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 RNF146Q9NTX7 359 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 PRKAG2Q9UGJ0 569 aa10.64□□□□□ -0.71
SPTAN1-219ENST00000629378 FAM184BQ9ULE4 1060 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms