RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 PPP1R9AQ9ULJ8 1098 aa11.46□□□□□ -0.57
SOX2-OT-249ENST00000628810 CNTNAP5Q8WYK1 1306 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 SPDYE16A6NNV3 312 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 KLRF2D3W0D1 207 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 CYTH3O43739 400 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 FLOT1O75955 427 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 PLEKHA8P1O95397 391 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 ALDH1A1P00352 501 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 GOLGA8HP0CJ92 632 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 FDX1P10109 184 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 OSBPP22059 807 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 IRX3P78415 501 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 ST3GAL1Q11201 340 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 SCRN1Q12765 414 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 COG2Q14746 738 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 NTRK3Q16288 839 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 OTUD7BQ6GQQ9 843 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 TTBK2Q6IQ55 1244 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 RAB11FIP4Q86YS3 637 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 HS6ST3Q8IZP7 471 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 DNAJC5GQ8N7S2 189 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 PRPF38AQ8NAV1 312 aaKnown RBP11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 GTF3C2Q8WUA4 911 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 CHURC1Q8WUH1 139 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 MTMR8Q96EF0 704 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 PARK7Q99497 189 aaKnown RBP11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 SLKQ9H2G2 1235 aaPredicted RBP11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 RIOX1Q9H6W3 641 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 GPCPD1Q9NPB8 672 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 FBXO28Q9NVF7 368 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 MTMR7Q9Y216 660 aa11.45□□□□□ -0.58
SOX2-OT-249ENST00000628810 FAM205CA6NFA0 338 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 IFNAR1P17181 557 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 ADD1P35611 737 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 HERVK_113P62684 666 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 GRM1Q13255 1194 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 SYDE2Q5VT97 1194 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 POTEEQ6S8J3 1075 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 NOL8Q76FK4 1167 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 NBPF11Q86T75 865 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 CCDC144CPQ8IYA2 1237 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 SRBD1Q8N5C6 995 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 MB21D1Q8N884 522 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 REPS2Q8NFH8 660 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 TMX3Q96JJ7 454 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 RANBP17Q9H2T7 1088 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 SLC38A10Q9HBR0 1119 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 NCOA5Q9HCD5 579 aaKnown RBP11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 HOXC10Q9NYD6 342 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 PRR12Q9ULL5 1215 aa11.44□□□□□ -0.58
SOX2-OT-249ENST00000628810 STK36Q9NRP7 1315 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 K7ELQ4 463 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 VWA5AO00534 786 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 ATP2A1O14983 1001 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 CA12O43570 354 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 DHX16O60231 1041 aaKnown RBP11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 SLC16A2P36021 539 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 OAZ1P54368 228 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 CCT2P78371 535 aaKnown RBP11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 CUL4AQ13619 759 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 ADGRF4Q8IZF3 695 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 CHMP4CQ96CF2 233 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 ATG4CQ96DT6 458 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 HS3ST6Q96QI5 342 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 P2RX7Q99572 595 aaKnown RBP11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 RNF26Q9BY78 433 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 JMJD4Q9H9V9 463 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 SAGE1Q9NXZ1 904 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 MORF4L1Q9UBU8 362 aa11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 NAP1L2Q9ULW6 460 aaPredicted RBP11.43□□□□□ -0.58
SOX2-OT-249ENST00000628810 COL11A1P12107 1806 aaPredicted RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 CDKL5O76039 1030 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 CTDNEP1O95476 244 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 CYP2C8P10632 490 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 GCLCP48506 637 aaPredicted RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 IKQ13123 557 aaPredicted RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 STK3Q13188 491 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 HSCBQ8IWL3 235 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 NECAB1Q8N987 351 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 NSUN7Q8NE18 718 aaKnown RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 LLPHQ9BRT6 129 aaKnown RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 UBA5Q9GZZ9 404 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 CPVLQ9H3G5 476 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 RBM27Q9P2N5 1060 aaKnown RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 ZNF214Q9UL59 606 aaPredicted RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 ISY1Q9ULR0 285 aaKnown RBP11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 RABGAP1Q9Y3P9 1069 aa11.42□□□□□ -0.58
SOX2-OT-249ENST00000628810 ZNF536O15090 1300 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 CPLX1O14810 134 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 PRPF3O43395 683 aaKnown RBP11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 TLR2O60603 784 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 CNMDO75829 334 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 FMNL1O95466 1100 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 BCRP11274 1271 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 CRHR2Q13324 411 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 TAF1CQ15572 869 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 CDC37Q16543 378 aaPredicted RBP11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 FAM110CQ1W6H9 321 aa11.41□□□□□ -0.58
SOX2-OT-249ENST00000628810 CPLX2Q6PUV4 134 aaKnown RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms