RNA–Protein interactions for RNA: ENST00000627784.2

TCF4-261, Transcript of transcription factor 4, humanhuman

TSL 4

Gene TCF4, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-261ENST00000627784 UBE3CQ15386 1083 aa20.24■□□□□ 0.83
TCF4-261ENST00000627784 ARMCX2Q7L311 632 aa20.24■□□□□ 0.83
TCF4-261ENST00000627784 ZNF467Q7Z7K2 595 aaPredicted RBP20.24■□□□□ 0.83
TCF4-261ENST00000627784 PRPF38AQ8NAV1 312 aaKnown RBP20.24■□□□□ 0.83
TCF4-261ENST00000627784 HAUS7Q99871 368 aa20.24■□□□□ 0.83
TCF4-261ENST00000627784 NKX2-4Q9H2Z4 354 aa20.24■□□□□ 0.83
TCF4-261ENST00000627784 ABHD16BQ9H3Z7 469 aa20.24■□□□□ 0.83
TCF4-261ENST00000627784 MCM3APO60318 1980 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 ATP2A1O14983 1001 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 HERVK_113Q902F9 699 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 KIFC2Q96AC6 838 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.23■□□□□ 0.831e-6■■■■□ 20.9
TCF4-261ENST00000627784 IL23AQ9NPF7 189 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 NYAP2Q9P242 653 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 DDX49Q9Y6V7 483 aaKnown RBP20.23■□□□□ 0.83
TCF4-261ENST00000627784 GREB1LQ9C091 1923 aaPredicted RBP20.23■□□□□ 0.83
TCF4-261ENST00000627784 ASTN1O14525 1302 aa20.23■□□□□ 0.83
TCF4-261ENST00000627784 MRPS5P82675 430 aaKnown RBP20.22■□□□□ 0.83
TCF4-261ENST00000627784 CNTN2Q02246 1040 aa20.22■□□□□ 0.83
TCF4-261ENST00000627784 PSRC1Q6PGN9 363 aaPredicted RBP20.22■□□□□ 0.83
TCF4-261ENST00000627784 CCDC174Q6PII3 467 aa20.22■□□□□ 0.83
TCF4-261ENST00000627784 ANKRD35Q8N283 1001 aa20.22■□□□□ 0.83
TCF4-261ENST00000627784 NECAB3Q96P71 396 aaPredicted RBP20.22■□□□□ 0.83
TCF4-261ENST00000627784 UHRF1Q96T88 793 aaPredicted RBP20.22■□□□□ 0.83
TCF4-261ENST00000627784 SPC25Q9HBM1 224 aa20.22■□□□□ 0.83
TCF4-261ENST00000627784 SLC38A10Q9HBR0 1119 aa20.22■□□□□ 0.83
TCF4-261ENST00000627784 CLIP2Q9UDT6 1046 aa20.22■□□□□ 0.83
TCF4-261ENST00000627784 NCOR1O75376 2440 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 ZBED4O75132 1171 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 RABGGTBP53611 331 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 CXCL17Q6UXB2 119 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.21■□□□□ 0.83
TCF4-261ENST00000627784 OTOP2Q7RTS6 562 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 DDRGK1Q96HY6 314 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 MSRAQ9UJ68 235 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 GRIN2DO15399 1336 aa20.21■□□□□ 0.83
TCF4-261ENST00000627784 IGKV6D-41A0A0C4DH26 115 aa20.2■□□□□ 0.82
TCF4-261ENST00000627784 GSG1L2A8MUP6 293 aa20.2■□□□□ 0.82
TCF4-261ENST00000627784 MYOGP15173 224 aa20.2■□□□□ 0.82
TCF4-261ENST00000627784 SLC43A3Q8NBI5 491 aa20.2■□□□□ 0.82
TCF4-261ENST00000627784 VWCEQ96DN2 955 aa20.2■□□□□ 0.82
TCF4-261ENST00000627784 STRBPQ96SI9 672 aaKnown RBP20.2■□□□□ 0.82
TCF4-261ENST00000627784 HOMER2Q9NSB8 354 aa20.2■□□□□ 0.82
TCF4-261ENST00000627784 ARPP21Q9UBL0 812 aaPredicted RBP20.2■□□□□ 0.82
TCF4-261ENST00000627784 MINDY4BA8MYZ0 360 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 TLR3O15455 904 aaKnown RBP20.19■□□□□ 0.82
TCF4-261ENST00000627784 FGBP02675 491 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 CCL23P55773 120 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 NKX3-2P78367 333 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 RAB30Q15771 203 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 SBK1Q52WX2 424 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 TMEM63BQ5T3F8 832 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 RPAP2Q8IXW5 612 aaPredicted RBP20.19■□□□□ 0.82
TCF4-261ENST00000627784 HIPK3Q9H422 1215 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 SLC28A3Q9HAS3 691 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 MKNK2Q9HBH9 465 aa20.19■□□□□ 0.82
TCF4-261ENST00000627784 SOWAHBA6NEL2 793 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 RAB11FIP3O75154 756 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 PRDM1O75626 825 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 TNFAIP2Q03169 654 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 LRRC47Q8N1G4 583 aaKnown RBP20.18■□□□□ 0.82
TCF4-261ENST00000627784 FAM133AQ8N9E0 248 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 CHST13Q8NET6 341 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 TRPV6Q9H1D0 765 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 WNT8AQ9H1J5 351 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 GNEQ9Y223 722 aaKnown RBP20.18■□□□□ 0.82
TCF4-261ENST00000627784 CTDP1Q9Y5B0 961 aaPredicted RBP20.18■□□□□ 0.82
TCF4-261ENST00000627784 TRANK1O15050 2925 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 GBF1Q92538 1859 aa20.18■□□□□ 0.82
TCF4-261ENST00000627784 TFF2Q03403 129 aa20.17■□□□□ 0.82
TCF4-261ENST00000627784 ITGA7Q13683 1181 aa20.17■□□□□ 0.82
TCF4-261ENST00000627784 NOL8Q76FK4 1167 aaKnown RBP20.17■□□□□ 0.82
TCF4-261ENST00000627784 MKL1Q969V6 931 aa20.17■□□□□ 0.82
TCF4-261ENST00000627784 CHMP4CQ96CF2 233 aa20.17■□□□□ 0.82
TCF4-261ENST00000627784 CEP95Q96GE4 821 aa20.17■□□□□ 0.82
TCF4-261ENST00000627784 PDGFCQ9NRA1 345 aa20.17■□□□□ 0.82
TCF4-261ENST00000627784 B4GALT4O60513 344 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 BMP1P13497 986 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 PSMC6P62333 389 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 MICALL1Q8N3F8 863 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 OSBP2Q969R2 916 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 AGBL1Q96MI9 1066 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 NOC4LQ9BVI4 516 aaKnown RBP20.16■□□□□ 0.82
TCF4-261ENST00000627784 EPB41L4AQ9HCS5 686 aaPredicted RBP20.16■□□□□ 0.82
TCF4-261ENST00000627784 ZBTB40Q9NUA8 1239 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 MTMR4Q9NYA4 1195 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 FBXO40Q9UH90 709 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 FEM1BQ9UK73 627 aa20.16■□□□□ 0.82
TCF4-261ENST00000627784 TCF20Q9UGU0 1960 aaKnown RBP20.15■□□□□ 0.82
TCF4-261ENST00000627784 SMARCA5O60264 1052 aaPredicted RBP20.15■□□□□ 0.82
TCF4-261ENST00000627784 HMMRO75330 724 aa20.15■□□□□ 0.82
TCF4-261ENST00000627784 SMPD1P17405 629 aa20.15■□□□□ 0.82
TCF4-261ENST00000627784 OAZ1P54368 228 aa20.15■□□□□ 0.82
TCF4-261ENST00000627784 FSCN1Q16658 493 aaKnown RBP20.15■□□□□ 0.82
TCF4-261ENST00000627784 TLK2Q86UE8 772 aa20.15■□□□□ 0.82
TCF4-261ENST00000627784 SCLYQ96I15 445 aa20.15■□□□□ 0.82
TCF4-261ENST00000627784 A1CFQ9NQ94 594 aaKnown RBP20.15■□□□□ 0.82
TCF4-261ENST00000627784 ZNF536O15090 1300 aa20.15■□□□□ 0.82
TCF4-261ENST00000627784 MYH7P12883 1935 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms