RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 PROSER2Q86WR7 435 aaPredicted RBP3.19□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 OLFM1Q99784 485 aa3.19□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 KCNK9Q9NPC2 374 aa3.19□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PRKAB1Q9Y478 270 aa3.19□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 HYOU1Q9Y4L1 999 aa3.19□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ARHGAP42A6NI28 874 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 SMAPO00193 183 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MYL3P08590 195 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ALDH3A1P30838 453 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MCM4P33991 863 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MAPK9P45984 424 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ATP5IP56385 69 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 EIF4G2P78344 907 aaKnown RBP eCLIP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ARL6IP6Q8N6S5 226 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ZNF579Q8NAF0 562 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 DHX58Q96C10 678 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 SCN8AQ9UQD0 1980 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 DUOX1Q9NRD9 1551 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ABCC6O95255 1503 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 GOLGA8CPA6NN73 597 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ZBED4O75132 1171 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PDE9AO76083 593 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CCDC192P0DO97 292 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 KRT3P12035 628 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CETN1Q12798 172 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MYBPC2Q14324 1141 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ALFQ53S48 1182 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 EP400NLQ6ZTU2 488 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 USP48Q86UV5 1035 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 KLHL7Q8IXQ5 586 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 RETREG2Q8NC44 543 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 TRIM58Q8NG06 486 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CCDC124Q96CT7 223 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 FGD4Q96M96 766 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 FRMD6Q96NE9 622 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 TUBA1CQ9BQE3 449 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MRPS26Q9BYN8 205 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 EHD2Q9NZN4 543 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ATP6V1HQ9UI12 483 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PPME1Q9Y570 386 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CCDC162PA2VCL2 907 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 LRRIQ3A6PVS8 624 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CETN2P41208 172 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PET117Q6UWS5 81 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MTURNQ8N3F0 131 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 DTX3LQ8TDB6 740 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 TAF4BQ92750 862 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CNDP2Q96KP4 475 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 BAG1Q99933 345 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MCM8Q9UJA3 840 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 GIT1Q9Y2X7 761 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ARPC4-TTLL3A0A0A6YYG9 625 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 POTECB2RU33 542 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 FESP07332 822 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CD53P19397 219 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 DMTNQ08495 405 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 DRP2Q13474 957 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ANKRD20A4Q4UJ75 823 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ANKRD20A8PQ5CZ79 823 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ANKRD20A2Q5SQ80 823 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ANKRD20A1Q5TYW2 823 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ANKRD20A3Q5VUR7 823 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 STXBP4Q6ZWJ1 553 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 TRMT44Q8IYL2 757 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 DIS3LQ8TF46 1054 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 GAL3ST1Q99999 423 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 SUCLA2Q9P2R7 463 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ERVK-7P63135 1459 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PAK3O75914 559 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 NCF2P19878 526 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 TUFMP49411 452 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 EPS8Q12929 822 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 LRIF1Q5T3J3 769 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 STK32CQ86UX6 486 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CDR2LQ86X02 465 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CSGALNACT2Q8N6G5 542 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 GOLGA5Q8TBA6 731 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PARD3BQ8TEW8 1205 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 SPIRE2Q8WWL2 714 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 FAM212AQ96EL1 285 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CNDP1Q96KN2 507 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 ACTR5Q9H9F9 607 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 MYH9P35579 1960 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 KRT38O76015 456 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 HSPA9P38646 679 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 SERPINB10P48595 397 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 EVCP57679 992 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CCSAPQ6IQ19 270 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 LARP1Q6PKG0 1096 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 PNMA8AQ86V59 439 aaPredicted RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 TRIM59Q8IWR1 403 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CHERPQ8IWX8 916 aaKnown RBP3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 SYCE1Q8N0S2 351 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 AFAP1L2Q8N4X5 818 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 CDC6Q99741 560 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 C22orf23Q9BZE7 217 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 SPANXA1Q9NS26 97 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 POLR3EQ9NVU0 708 aa3.18□□□□□ -1.9
KCNIP4-IT1-201ENST00000627566 RPH3AQ9Y2J0 694 aaPredicted RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms