RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 CYP2B6P20813 491 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 STAT2P52630 851 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 ZNF543Q08ER8 600 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 MAP2K5Q13163 448 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 TMEM132BQ14DG7 1078 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 CCL14Q16627 93 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 ASPRV1Q53RT3 343 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 GPATCH4Q5T3I0 446 aaKnown RBP17.16■□□□□ 0.34
PNKP-221ENST00000627317 FAM160B2Q86V87 743 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 SGMS1Q86VZ5 419 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 U2AF1L4Q8WU68 220 aaKnown RBP17.16■□□□□ 0.34
PNKP-221ENST00000627317 CHURC1Q8WUH1 139 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 BRF1Q92994 677 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 TBC1D32Q96NH3 1257 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 SLF1Q9BQI6 1058 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 CRISPLD2Q9H0B8 497 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 GPCPD1Q9NPB8 672 aa17.16■□□□□ 0.34
PNKP-221ENST00000627317 ZNF214Q9UL59 606 aaPredicted RBP17.16■□□□□ 0.34
PNKP-221ENST00000627317 NAP1L2Q9ULW6 460 aaPredicted RBP17.16■□□□□ 0.34
PNKP-221ENST00000627317 KLF18A0A0U1RQI7 1052 aa17.15■□□□□ 0.34
PNKP-221ENST00000627317 ERCC3P19447 782 aa17.15■□□□□ 0.34
PNKP-221ENST00000627317 RGS2P41220 211 aa17.15■□□□□ 0.34
PNKP-221ENST00000627317 KIFC2Q96AC6 838 aa17.15■□□□□ 0.34
PNKP-221ENST00000627317 MYL10Q9BUA6 226 aa17.15■□□□□ 0.34
PNKP-221ENST00000627317 SGPL1O95470 568 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 CALM1P0DP23 149 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 CALM2P0DP24 149 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 CALM3P0DP25 149 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 APOBRQ0VD83 1088 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 GRM4Q14833 912 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 APOA5Q6Q788 366 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 MICU3Q86XE3 530 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 CCAR1Q8IX12 1150 aaKnown RBP17.14■□□□□ 0.33
PNKP-221ENST00000627317 TRMT44Q8IYL2 757 aaKnown RBP17.14■□□□□ 0.33
PNKP-221ENST00000627317 FBXL16Q8N461 479 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 PRPF38AQ8NAV1 312 aaKnown RBP17.14■□□□□ 0.33
PNKP-221ENST00000627317 CTCFLQ8NI51 663 aaPredicted RBP17.14■□□□□ 0.33
PNKP-221ENST00000627317 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.14■□□□□ 0.33
PNKP-221ENST00000627317 FLRT1Q9NZU1 646 aa17.14■□□□□ 0.33
PNKP-221ENST00000627317 CTDP1Q9Y5B0 961 aaPredicted RBP17.14■□□□□ 0.33
PNKP-221ENST00000627317 GOLGA8BA8MQT2 603 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 ZBTB43O43298 467 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 PLA2G6O60733 806 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 GOLGA8HP0CJ92 632 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 PRKAR2AP13861 404 aaKnown RBP17.13■□□□□ 0.33
PNKP-221ENST00000627317 KIF5BP33176 963 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 NEK4P51957 841 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 TROAPQ12815 778 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 SYDE2Q5VT97 1194 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 RAB11FIP4Q86YS3 637 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 AGXT2Q9BYV1 514 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 MROH8Q9H579 483 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 RPTORQ8N122 1335 aa17.13■□□□□ 0.33
PNKP-221ENST00000627317 GOLGA8AA7E2F4 631 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 ATP2A1O14983 1001 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 STRNO43815 780 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 RXRAP19793 462 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 ADORA2AP29274 412 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 SLC16A2P36021 539 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 CACNB2Q08289 660 aaPredicted RBP17.12■□□□□ 0.33
PNKP-221ENST00000627317 TOB2Q14106 344 aaPredicted RBP17.12■□□□□ 0.33
PNKP-221ENST00000627317 RABEP1Q15276 862 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 ANKRD1Q15327 319 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 TTBK2Q6IQ55 1244 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 RIOX2Q8IUF8 465 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 CCDC144CPQ8IYA2 1237 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 ABRAQ8N0Z2 381 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 NPLOC4Q8TAT6 608 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 MAP3K14Q99558 947 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 BRPF3Q9ULD4 1205 aa17.12■□□□□ 0.33
PNKP-221ENST00000627317 DHX16O60231 1041 aaKnown RBP17.11■□□□□ 0.33
PNKP-221ENST00000627317 COBLO75128 1261 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 ZBED4O75132 1171 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 WDR78Q5VTH9 848 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 PRPF38BQ5VTL8 546 aaKnown RBP17.11■□□□□ 0.33
PNKP-221ENST00000627317 BTNL9Q6UXG8 535 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 KIF2CQ99661 725 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 MAD2L2Q9UI95 211 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 PRR12Q9ULL5 1215 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 IVNS1ABPQ9Y6Y0 642 aa17.11■□□□□ 0.33
PNKP-221ENST00000627317 COL11A1P12107 1806 aaPredicted RBP17.1■□□□□ 0.33
PNKP-221ENST00000627317 PALM3A6NDB9 673 aaPredicted RBP17.1■□□□□ 0.33
PNKP-221ENST00000627317 KLRF2D3W0D1 207 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 SLC25A27O95847 323 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 FDX1P10109 184 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 CAPN2P17655 700 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 GNAQP50148 359 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 MNX1P50219 401 aaPredicted RBP17.1■□□□□ 0.33
PNKP-221ENST00000627317 METAP2P50579 478 aaKnown RBP eCLIP17.1■□□□□ 0.33
PNKP-221ENST00000627317 RCAN1P53805 252 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 PLS1Q14651 629 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 RTN1Q16799 776 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 STAG2Q8N3U4 1231 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 ALDH8A1Q9H2A2 487 aaPredicted RBP17.1■□□□□ 0.33
PNKP-221ENST00000627317 SLC38A10Q9HBR0 1119 aa17.1■□□□□ 0.33
PNKP-221ENST00000627317 CWC22Q9HCG8 908 aaKnown RBP17.1■□□□□ 0.33
PNKP-221ENST00000627317 HMX1Q9NP08 348 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms