RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 TADA3O75528 432 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 UFL1O94874 794 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 ZRANB2O95218 330 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 CALML3P27482 149 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 KCNB1Q14721 858 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 SLC51AQ86UW1 340 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 GRAMD1CQ8IYS0 662 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 CTAGE1Q96RT6 745 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 BRMS1Q9HCU9 246 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 SAMSN1Q9NSI8 373 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 PCDHA4Q9UN74 947 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 SYNRGQ9UMZ2 1314 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 COL11A2P13942 1736 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 PPEF1O14829 653 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 IL1R1P14778 569 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 PRDX5P30044 214 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 FBXO38Q6PIJ6 1188 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 SYT10Q6XYQ8 523 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 ZNF662Q6ZS27 426 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 RSRC2Q7L4I2 434 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 MNS1Q8NEH6 495 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 BAG1Q99933 345 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 CD2APQ9Y5K6 639 aa8.11□□□□□ -1.11
CTNNA1-244ENST00000627109 MYH7BA7E2Y1 1941 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 KLRG2A4D1S0 409 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 PRDM1O75626 825 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 PTGDRQ13258 359 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 GRAPQ13588 217 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 DOK7Q18PE1 504 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 RASGRP2Q7LDG7 609 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 TXNRD3Q86VQ6 643 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 LARGE2Q8N3Y3 721 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 GRAPLQ8TC17 118 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 RTFDC1Q9BY42 306 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 CCSER1Q9C0I3 900 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 MRFAP1Q9Y605 127 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 RGPD3A6NKT7 1758 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 RGPD4Q7Z3J3 1758 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 GAKO14976 1311 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 FLT1P17948 1338 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 FAM205AQ6ZU69 1335 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 ADAMTSL1Q8N6G6 1762 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 EFCAB8A8MWE9 144 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 KIF5BP33176 963 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 GOLGA8FQ08AF8 430 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 GOLGA8DPQ0D2H9 430 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 NAALADL2Q58DX5 795 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 ZNF658Q5TYW1 1059 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 WDR66Q8TBY9 1149 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 JDP2Q8WYK2 163 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 CCDC34Q96HJ3 373 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 LZTS2Q9BRK4 669 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 SPZ1Q9BXG8 430 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 ZNF277Q9NRM2 450 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 PSME4Q14997 1843 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 KLRC4O43908 158 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 NMT2O60551 498 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 BBOX1O75936 387 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 GABPB1Q06547 395 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 LRRN4CLQ8ND94 238 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 CTCFLQ8NI51 663 aaPredicted RBP8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 CPLX3Q8WVH0 158 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 MAGEF1Q9HAY2 307 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 KBTBD4Q9NVX7 518 aa8.1□□□□□ -1.11
CTNNA1-244ENST00000627109 MYH4Q9Y623 1939 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 STXBP3O00186 592 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 ATP8B1O43520 1251 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 MFAP3LO75121 409 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 URI1O94763 535 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 CYP2D6P10635 497 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 VEGFAP15692 232 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 AFMP43652 599 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 TGFB2P61812 414 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 FOXR2Q6PJQ5 311 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 BLIDQ8IZY5 108 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 IQUBQ8NA54 791 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 VTI1AQ96AJ9 217 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 BARHL2Q9NY43 387 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 PPIP5K2O43314 1243 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 CYTH3O43739 400 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 HOXA7P31268 230 aaPredicted RBP8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 GNAQP50148 359 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 IRF5Q13568 498 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 TYW1BQ6NUM6 668 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 CNNM4Q6P4Q7 775 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 TOGARAM2Q6ZUX3 1019 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 C16orf86Q6ZW13 317 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 ZBTB9Q96C00 473 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 ZMYND12Q9H0C1 365 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 CUEDC2Q9H467 287 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 PCDHA6Q9UN73 950 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 PCDHA8Q9Y5H6 950 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 GPR75-ASB3A0A0A6YYF3 556 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 ESYT2A0FGR8 921 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 GSTO1P78417 241 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 ELF2Q15723 593 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 MSL3Q8N5Y2 521 aaKnown RBP8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 DHX58Q96C10 678 aa8.09□□□□□ -1.11
CTNNA1-244ENST00000627109 RBBP6Q7Z6E9 1792 aaKnown RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms