RNA–Protein interactions for RNA: ENST00000626466.1

TCF4-253, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-253ENST00000626466 NECAB3Q96P71 396 aaPredicted RBP12.73□□□□□ -0.37
TCF4-253ENST00000626466 ASB2Q96Q27 587 aa12.73□□□□□ -0.37
TCF4-253ENST00000626466 ZBTB47Q9UFB7 747 aaPredicted RBP12.73□□□□□ -0.37
TCF4-253ENST00000626466 ELP1O95163 1332 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 A0A0U1RQG5 324 aaPredicted RBP12.72□□□□□ -0.37
TCF4-253ENST00000626466 F5H6K3 240 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 ARVCFO00192 962 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 COPB2P35606 906 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 GJA9P57773 515 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 CNTN2Q02246 1040 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 KLRC3Q07444 240 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 ARMCX2Q7L311 632 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 GAS2L1Q99501 681 aaPredicted RBP12.72□□□□□ -0.37
TCF4-253ENST00000626466 HAUS7Q99871 368 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 THEGQ9P2T0 379 aa12.72□□□□□ -0.37
TCF4-253ENST00000626466 GRIN2DO15399 1336 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 IGKV6D-41A0A0C4DH26 115 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 RBAK-RBAKDNI3L0D1 243 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 CD4P01730 458 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 MYOGP15173 224 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 ATP5JP18859 108 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 IGFBP4P22692 258 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 RABGGTBP53611 331 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 UBE3CQ15386 1083 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 HSP90AB4PQ58FF6 505 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 GNASQ5JWF2 1037 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 AKNAD1Q5T1N1 836 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 TMEM63BQ5T3F8 832 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 CXCL17Q6UXB2 119 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 ZNF467Q7Z7K2 595 aaPredicted RBP12.71□□□□□ -0.37
TCF4-253ENST00000626466 CCDC144CPQ8IYA2 1237 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 LRRC47Q8N1G4 583 aaKnown RBP12.71□□□□□ -0.37
TCF4-253ENST00000626466 MSL3Q8N5Y2 521 aaKnown RBP12.71□□□□□ -0.37
TCF4-253ENST00000626466 SPDYE1Q8NFV5 336 aaPredicted RBP12.71□□□□□ -0.37
TCF4-253ENST00000626466 ATXN2LQ8WWM7 1075 aaKnown RBP12.71□□□□□ -0.37
TCF4-253ENST00000626466 KIFC2Q96AC6 838 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 VTI1AQ96AJ9 217 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 EPB41L4AQ9HCS5 686 aaPredicted RBP12.71□□□□□ -0.37
TCF4-253ENST00000626466 HOMER2Q9NSB8 354 aa12.71□□□□□ -0.37
TCF4-253ENST00000626466 TTC28Q96AY4 2481 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 MROH7Q68CQ1 1323 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 GSG1L2A8MUP6 293 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 ATP2A1O14983 1001 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 PRDM1O75626 825 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 CCL23P55773 120 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 PSRC1Q6PGN9 363 aaPredicted RBP12.7□□□□□ -0.38
TCF4-253ENST00000626466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
TCF4-253ENST00000626466 OTOP2Q7RTS6 562 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 TMEM199Q8N511 208 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 HERVK_113Q902F9 699 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 CHMP4CQ96CF2 233 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 STRBPQ96SI9 672 aaKnown RBP12.7□□□□□ -0.38
TCF4-253ENST00000626466 WNT8AQ9H1J5 351 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 SLC38A10Q9HBR0 1119 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 IL23AQ9NPF7 189 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 CLIP2Q9UDT6 1046 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 LRRC37A2A6NM11 1700 aa12.7□□□□□ -0.38
TCF4-253ENST00000626466 MCM3APO60318 1980 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 SMARCA5O60264 1052 aaPredicted RBP12.69□□□□□ -0.38
TCF4-253ENST00000626466 PSMC6P62333 389 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 RASGRP2Q7LDG7 609 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 ANKRD35Q8N283 1001 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 PRPF38AQ8NAV1 312 aaKnown RBP12.69□□□□□ -0.38
TCF4-253ENST00000626466 SLC43A3Q8NBI5 491 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 PCSK9Q8NBP7 692 aaKnown RBP12.69□□□□□ -0.38
TCF4-253ENST00000626466 UHRF1Q96T88 793 aaPredicted RBP12.69□□□□□ -0.38
TCF4-253ENST00000626466 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.69□□□□□ -0.384e-6■■■□□ 18.8
TCF4-253ENST00000626466 TRPV6Q9H1D0 765 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 ABHD16BQ9H3Z7 469 aa12.69□□□□□ -0.38
TCF4-253ENST00000626466 ARPP21Q9UBL0 812 aaPredicted RBP12.69□□□□□ -0.38
TCF4-253ENST00000626466 SOWAHBA6NEL2 793 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 MINDY4BA8MYZ0 360 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 B4GALT4O60513 344 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 ZBED4O75132 1171 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 SNAP25P60880 206 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 NKX3-2P78367 333 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 MRPS5P82675 430 aaKnown RBP12.68□□□□□ -0.38
TCF4-253ENST00000626466 HNRNPUQ00839 825 aaKnown RBP eCLIP12.68□□□□□ -0.38
TCF4-253ENST00000626466 TFF2Q03403 129 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 FAM133AQ8N9E0 248 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 OSBP2Q969R2 916 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 CEP95Q96GE4 821 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 NOC4LQ9BVI4 516 aaKnown RBP12.68□□□□□ -0.38
TCF4-253ENST00000626466 HIPK3Q9H422 1215 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 A1CFQ9NQ94 594 aaKnown RBP12.68□□□□□ -0.38
TCF4-253ENST00000626466 PDGFCQ9NRA1 345 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 GNEQ9Y223 722 aaKnown RBP12.68□□□□□ -0.38
TCF4-253ENST00000626466 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 GBF1Q92538 1859 aa12.68□□□□□ -0.38
TCF4-253ENST00000626466 ZNF536O15090 1300 aa12.67□□□□□ -0.38
TCF4-253ENST00000626466 RFXAPO00287 272 aa12.67□□□□□ -0.38
TCF4-253ENST00000626466 TLR3O15455 904 aaKnown RBP12.67□□□□□ -0.38
TCF4-253ENST00000626466 ARHGEF15O94989 841 aa12.67□□□□□ -0.38
TCF4-253ENST00000626466 SMPD1P17405 629 aa12.67□□□□□ -0.38
TCF4-253ENST00000626466 KCNQ1P51787 676 aa12.67□□□□□ -0.38
TCF4-253ENST00000626466 RAB30Q15771 203 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms