RNA–Protein interactions for RNA: ENST00000625705.1

NPLOC4-221, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5 BASIC

Gene NPLOC4, Length 405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-221ENST00000625705 TRIM17Q9Y577 477 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 RBM8AQ9Y5S9 174 aaKnown RBP8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 CASP8AP2Q9UKL3 1982 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 NEDD4P46934 1319 aa8.51□□□□□ -1.05
NPLOC4-221ENST00000625705 PLIN4Q96Q06 1357 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 A0A1W2PRG0 241 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 ERICH2A1L162 156 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 TULP1O00294 542 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 WDR46O15213 610 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 KDM4AO75164 1064 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 FLOT1O75955 427 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 REC8O95072 547 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 FMNL1O95466 1100 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 HERVK_113P62684 666 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 PTH1RQ03431 593 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 MOGSQ13724 837 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 CCDC96Q2M329 555 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 NOM1Q5C9Z4 860 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 COL13A1Q5TAT6 717 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 WDR78Q5VTH9 848 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 CTU1Q7Z7A3 348 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 ZNF598Q86UK7 904 aaKnown RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 GTF3C2Q8WUA4 911 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 CHMP4CQ96CF2 233 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 C12orf42Q96LP6 360 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 MTMR4Q9NYA4 1195 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 NYAP2Q9P242 653 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 GREB1LQ9C091 1923 aaPredicted RBP8.5□□□□□ -1.05
NPLOC4-221ENST00000625705 TNPO2O14787 897 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 NMT2O60551 498 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 HOXA7P31268 230 aaPredicted RBP8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 FCGRTP55899 365 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 CCNA1P78396 465 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 MAP2K5Q13163 448 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 PLS1Q14651 629 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 SART3Q15020 963 aaKnown RBP8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 CCDC178Q5BJE1 867 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 FAM83BQ5T0W9 1011 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 NCOA7Q8NI08 942 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 THAP11Q96EK4 314 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 ZKSCAN3Q9BRR0 538 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 EFCC1Q9HA90 598 aa8.49□□□□□ -1.05
NPLOC4-221ENST00000625705 F5H6K3 240 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 NDUFB10O96000 172 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 TOP1P11387 765 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 ZKSCAN1P17029 563 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 HOXD10P28358 340 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 SLC1A4P43007 532 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 PSMC4P43686 418 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 NT5C2P49902 561 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 LACTBP83111 547 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 KLRC3Q07444 240 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 COG2Q14746 738 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 FAM110CQ1W6H9 321 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 SLFN13Q68D06 897 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 C17orf99Q6UX52 265 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 GPRC5AQ8NFJ5 357 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 MAP4K1Q92918 833 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 COA7Q96BR5 231 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 NUP88Q99567 741 aaPredicted RBP8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 P2RX7Q99572 595 aaKnown RBP8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 KAT14Q9H8E8 782 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 HOXC10Q9NYD6 342 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 SYNPO2Q9UMS6 1093 aa8.48□□□□□ -1.05
NPLOC4-221ENST00000625705 IGKV6D-41A0A0C4DH26 115 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 E7EWF7 191 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 IFIT3O14879 490 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 DHX16O60231 1041 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 EIF5BO60841 1220 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 CYP21A2P08686 494 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 BMP3P12645 472 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 MCCP23508 829 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 PKN2Q16513 984 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 IFIT1BQ5T764 474 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 CREB3L3Q68CJ9 461 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 CATSPERGQ6ZRH7 1159 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 OTOP1Q7RTM1 612 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 SIAH1Q8IUQ4 282 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 GMCL1P1Q8NEA9 526 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 RAET1EQ8TD07 263 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 KIFC2Q96AC6 838 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 ZSCAN10Q96SZ4 725 aaPredicted RBP8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 SLF1Q9BQI6 1058 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 MCOLN1Q9GZU1 580 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 LSG1Q9H089 658 aaKnown RBP8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 IVNS1ABPQ9Y6Y0 642 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 TNKSO95271 1327 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 ADGRA2Q96PE1 1338 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 ZSWIM8A7E2V4 1837 aa8.47□□□□□ -1.05
NPLOC4-221ENST00000625705 TNFRSF10AO00220 468 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 SLC27A2O14975 620 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 GNRH1P01148 92 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 FGRP09769 529 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 BCRP11274 1271 aa8.46□□□□□ -1.06
NPLOC4-221ENST00000625705 MAPK4P31152 587 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms