RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 TRAF5O00463 557 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 PPP6R2O75170 966 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 BMP15O95972 392 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 GRM1Q13255 1194 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 ORC2Q13416 577 aaPredicted RBP13.5□□□□□ -0.25
LINC00963-220ENST00000625171 KIAA1755Q5JYT7 1200 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 LDLRAD1Q5T700 205 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 TYW1BQ6NUM6 668 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 FAM173BQ6P4H8 233 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 RASGRP2Q7LDG7 609 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 ANKRD13AQ8IZ07 590 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 SAMD3Q8N6K7 520 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 PRPF38AQ8NAV1 312 aaKnown RBP13.5□□□□□ -0.25
LINC00963-220ENST00000625171 KCNG4Q8TDN1 519 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 CDCA5Q96FF9 252 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 USP28Q96RU2 1077 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 AMNQ9BXJ7 453 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 MCOLN1Q9GZU1 580 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 EMILIN3Q9NT22 766 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 TFIP11Q9UBB9 837 aaKnown RBP13.5□□□□□ -0.25
LINC00963-220ENST00000625171 POLR2AP24928 1970 aaKnown RBP13.5□□□□□ -0.25
LINC00963-220ENST00000625171 MYH6P13533 1939 aa13.5□□□□□ -0.25
LINC00963-220ENST00000625171 DOCK1Q14185 1865 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 ADM5C9JUS6 153 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 NCLP19338 710 aaKnown RBP13.49□□□□□ -0.25
LINC00963-220ENST00000625171 TOB1P50616 345 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-220ENST00000625171 MRPL12P52815 198 aaKnown RBP13.49□□□□□ -0.25
LINC00963-220ENST00000625171 PPATQ06203 517 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 FMR1Q06787 632 aaKnown RBP eCLIP13.49□□□□□ -0.25
LINC00963-220ENST00000625171 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
LINC00963-220ENST00000625171 QRICH1Q2TAL8 776 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 PRAMEF18Q5VWM3 479 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 ANO1Q5XXA6 986 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 ZKSCAN4Q969J2 545 aaPredicted RBP13.49□□□□□ -0.25
LINC00963-220ENST00000625171 RANBP17Q9H2T7 1088 aaKnown RBP13.49□□□□□ -0.25
LINC00963-220ENST00000625171 VAT1LQ9HCJ6 419 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 RIC8AQ9NPQ8 531 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 PRR12Q9ULL5 1215 aa13.49□□□□□ -0.25
LINC00963-220ENST00000625171 MYPNQ86TC9 1320 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 A0A1W2PQ27 194 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 A0A1W2PQ64 194 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 A0A1W2PQD8 194 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 SMCO2A6NFE2 343 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 CXCL11O14625 94 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 PPP1R11O60927 126 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-220ENST00000625171 AOC2O75106 756 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 SLC16A2P36021 539 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 CLK2P49760 499 aaKnown RBP13.48□□□□□ -0.25
LINC00963-220ENST00000625171 NAPAP54920 295 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 GHRHRQ02643 423 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 SPP2Q13103 211 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 NR5A1Q13285 461 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 PTPAQ15257 358 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 FAM83BQ5T0W9 1011 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 ADALQ6DHV7 355 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 ARMC9Q7Z3E5 817 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 KRT25Q7Z3Z0 450 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 HEATR3Q7Z4Q2 680 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 ERO1BQ86YB8 467 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 CHAMP1Q96JM3 812 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 GLIS2Q9BZE0 524 aaPredicted RBP13.48□□□□□ -0.25
LINC00963-220ENST00000625171 CPVLQ9H3G5 476 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 NOL7Q9UMY1 257 aaKnown RBP13.48□□□□□ -0.25
LINC00963-220ENST00000625171 PCDHA6Q9UN73 950 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 ADAMTS5Q9UNA0 930 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 CEP131Q9UPN4 1083 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 PCDHA8Q9Y5H6 950 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 CSADQ9Y600 493 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 ZHX2Q9Y6X8 837 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 BAZ2BQ9UIF8 2168 aaKnown RBP13.48□□□□□ -0.25
LINC00963-220ENST00000625171 ATAD5Q96QE3 1844 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 PAPPA2Q9BXP8 1791 aa13.48□□□□□ -0.25
LINC00963-220ENST00000625171 TCHHQ07283 1943 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 FIBPO43427 364 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 CELF2O95319 508 aaKnown RBP13.47□□□□□ -0.25
LINC00963-220ENST00000625171 NOGQ13253 232 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 VGLL4Q14135 290 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 CDC37Q16543 378 aaPredicted RBP13.47□□□□□ -0.25
LINC00963-220ENST00000625171 FBXO11Q86XK2 927 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 HOMER1Q86YM7 354 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 GPKOWQ92917 476 aaPredicted RBP eCLIP13.47□□□□□ -0.25
LINC00963-220ENST00000625171 FEZ1Q99689 392 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 MAP3K20Q9NYL2 800 aaKnown RBP13.47□□□□□ -0.25
LINC00963-220ENST00000625171 TSKSQ9UJT2 592 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 KCNH4Q9UQ05 1017 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 PCDHA1Q9Y5I3 950 aa13.47□□□□□ -0.25
LINC00963-220ENST00000625171 DDX49Q9Y6V7 483 aaKnown RBP13.47□□□□□ -0.25
LINC00963-220ENST00000625171 PDE4DIPQ5VU43 2346 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 SPDYE5A6NIY4 337 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 PIK3CDO00329 1044 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 ATP2A1O14983 1001 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 SPTLC2O15270 562 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 VCAM1P19320 739 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 FOSBP53539 338 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 OAZ1P54368 228 aa13.46□□□□□ -0.25
LINC00963-220ENST00000625171 SF3A1Q15459 793 aaKnown RBP13.46□□□□□ -0.25
LINC00963-220ENST00000625171 SPICE1Q8N0Z3 855 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms