RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 LRP8Q14114 963 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 RASA2Q15283 850 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 UBXN4Q92575 508 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 CDK5RAP3Q96JB5 506 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 METTL22Q9BUU2 404 aaPredicted RBP10.23□□□□□ -0.77
USB1-216ENST00000624720 MYO1AQ9UBC5 1043 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 SLC30A1Q9Y6M5 507 aa10.23□□□□□ -0.77
USB1-216ENST00000624720 SMIM24O75264 130 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 STAM2O75886 525 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 SH2D4BQ5SQS7 431 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 CCDC50Q8IVM0 306 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 MAGEC3Q8TD91 643 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 ATRIPQ8WXE1 791 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 NAP1L3Q99457 506 aaPredicted RBP10.22□□□□□ -0.77
USB1-216ENST00000624720 DCAF16Q9NXF7 216 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 SLC5A4Q9NY91 659 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 GOLGA6L4A6NEF3 574 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 TMEM232C9JQI7 657 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 PTGS1P23219 599 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 SLMAPQ14BN4 828 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 SPDYCQ5MJ68 293 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 BZW1Q7L1Q6 419 aaKnown RBP10.22□□□□□ -0.77
USB1-216ENST00000624720 PPP1R14BQ96C90 147 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 UBE2OQ9C0C9 1292 aaKnown RBP10.22□□□□□ -0.77
USB1-216ENST00000624720 CCDC171Q6TFL3 1326 aa10.22□□□□□ -0.77
USB1-216ENST00000624720 FOXD2O60548 495 aaPredicted RBP10.21□□□□□ -0.77
USB1-216ENST00000624720 FNTAP49354 379 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 TUFMP49411 452 aaKnown RBP10.21□□□□□ -0.77
USB1-216ENST00000624720 CTAG1AP78358 180 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 DYNC1I2Q13409 638 aaKnown RBP10.21□□□□□ -0.77
USB1-216ENST00000624720 SEPT2Q15019 361 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 BMP2KLQ5H9B9 411 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 POTEEQ6S8J3 1075 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 BRAPQ7Z569 592 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 KIAA1958Q8N8K9 716 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 NR1H4Q96RI1 486 aaPredicted RBP10.21□□□□□ -0.77
USB1-216ENST00000624720 BOLA2Q9H3K6 86 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 ORC3Q9UBD5 711 aaPredicted RBP10.21□□□□□ -0.77
USB1-216ENST00000624720 SLC45A1Q9Y2W3 748 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 GMEB1Q9Y692 573 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 GJA3Q9Y6H8 435 aa10.21□□□□□ -0.77
USB1-216ENST00000624720 NCAPD2Q15021 1401 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 AMPD3Q01432 767 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 SKIDA1Q1XH10 827 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 SH3TC2Q8TF17 1288 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 APPBP2Q92624 585 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 SPAG5Q96R06 1193 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 MAP3K14Q99558 947 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 MRPL46Q9H2W6 279 aaKnown RBP10.21□□□□□ -0.78
USB1-216ENST00000624720 CENPHQ9H3R5 247 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 PREBQ9HCU5 417 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 ARFGAP3Q9NP61 516 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 ANO2Q9NQ90 1003 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 DKK3Q9UBP4 350 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 SCINQ9Y6U3 715 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 SPATA31A1Q5TZJ5 1347 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 LRP6O75581 1613 aa10.21□□□□□ -0.78
USB1-216ENST00000624720 ZSCAN12O43309 604 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 FSBPO95073 299 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 IFIT2P09913 472 aaKnown RBP10.2□□□□□ -0.78
USB1-216ENST00000624720 SLC8A1P32418 973 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 LRP10Q7Z4F1 713 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 RSPH3Q86UC2 560 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 RBM46Q8TBY0 533 aaKnown RBP10.2□□□□□ -0.78
USB1-216ENST00000624720 USP6NLQ92738 828 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 EPSTI1Q96J88 318 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 CEP63Q96MT8 703 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 IER2Q9BTL4 223 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 IL25Q9H293 177 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 TRPC6Q9Y210 931 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 TTLL3Q9Y4R7 772 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 COL18A1P39060 1754 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 TMEM247A6NEH6 219 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 CDC45O75419 566 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 STARD3NLO95772 234 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 LDHCP07864 332 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 PDGFRBP09619 1106 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 TROVE2P10155 538 aaKnown RBP eCLIP10.2□□□□□ -0.78
USB1-216ENST00000624720 BCRP11274 1271 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 SNCBQ16143 134 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 SHROOM1Q2M3G4 852 aaPredicted RBP10.2□□□□□ -0.78
USB1-216ENST00000624720 RELL1Q8IUW5 271 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 LILRB2Q8N423 598 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 TTC39CQ8N584 583 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 GSDMBQ8TAX9 411 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 SSH3Q8TE77 659 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 DYDC1Q8WWB3 177 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.2□□□□□ -0.78
USB1-216ENST00000624720 SNAP23O00161 211 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 CD2BP2O95400 341 aaKnown RBP10.2□□□□□ -0.78
USB1-216ENST00000624720 TUBA1BP68363 451 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 COX10Q12887 443 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 KCTD2Q14681 263 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 MSL1Q68DK7 614 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 TUBA1AQ71U36 451 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 SPATA17Q96L03 361 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 USP26Q9BXU7 913 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 FUT8Q9BYC5 575 aa10.2□□□□□ -0.78
USB1-216ENST00000624720 PUS3Q9BZE2 481 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms