RNA–Protein interactions for RNA: ENST00000622320.4

RRP12-215, Transcript of ribosomal RNA processing 12 homolog, human

TSL 4

Gene RRP12, Length 543 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RRP12-215	ENST00000622320	DNAJC25-GNG10	A0A024R161	153 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	DCX	O43602	365 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	POLR3D	P05423	398 aa	Predicted RBP	12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	GNAI3	P08754	354 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	RLBP1	P12271	317 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	IL9	P15248	144 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	ITGA7	Q13683	1181 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	CCDC158	Q5M9N0	1113 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	ZNF467	Q7Z7K2	595 aa	Predicted RBP	12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	TMEM57	Q8N5G2	664 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	REPS2	Q8NFH8	660 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	GDPD5	Q8WTR4	605 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	DDX11	Q96FC9	970 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	AGBL1	Q96MI9	1066 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	PHOX2B	Q99453	314 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	DBNDD2	Q9BQY9	259 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	TRPV6	Q9H1D0	765 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	RCAN3	Q9UKA8	241 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	PPP1R9A	Q9ULJ8	1098 aa		12.48	□□□□□ -0.41
RRP12-215	ENST00000622320	ASTN1	O14525	1302 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	GRIN2D	O15399	1336 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	SI	P14410	1827 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	CABYR	O75952	493 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	NKX3-2	P78367	333 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	LEXM	Q3ZCV2	418 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	DEFB128	Q7Z7B8	93 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	MAGEB6	Q8N7X4	407 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	CLUAP1	Q96AJ1	413 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	TEX13B	Q9BXU2	312 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	ABHD16B	Q9H3Z7	469 aa		12.47	□□□□□ -0.41
RRP12-215	ENST00000622320	ST18	O60284	1047 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	ACTN1	P12814	892 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	KCNA5	P22460	613 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	TNNI3K	Q59H18	835 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	SNRNP48	Q6IEG0	339 aa	Known RBP	12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	ARMCX2	Q7L311	632 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	TLK2	Q86UE8	772 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	SIAH1	Q8IUQ4	282 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	HERC6	Q8IVU3	1022 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	ZNF512B	Q96KM6	892 aa	Predicted RBP	12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	FGD4	Q96M96	766 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	FPGT-TNNI3K	V9GXZ4	949 aa		12.46	□□□□□ -0.41
RRP12-215	ENST00000622320	WDFY4	Q6ZS81	3184 aa		12.46	□□□□□ -0.42
RRP12-215	ENST00000622320	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	KIF28P	B7ZC32	967 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	MS4A1	P11836	297 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	AKR1B1	P15121	316 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	PSMC6	P62333	389 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	G3BP1	Q13283	466 aa	Known RBP eCLIP	12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	PTCRA	Q6ISU1	281 aa	Predicted RBP	12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	HFE2	Q6ZVN8	426 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	PHOSPHO2	Q8TCD6	241 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	ANKS1A	Q92625	1134 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	RIOK1	Q9BRS2	568 aa	Known RBP	12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	SEZ6L	Q9BYH1	1024 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	KATNBL1	Q9H079	304 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	MCM9	Q9NXL9	1143 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	LMCD1	Q9NZU5	365 aa		12.45	□□□□□ -0.42
RRP12-215	ENST00000622320	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	FSCN1	Q16658	493 aa	Known RBP	12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	FAM83B	Q5T0W9	1011 aa		12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	NOL8	Q76FK4	1167 aa	Known RBP	12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	GPR108	Q9NPR9	543 aa		12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	SWAP70	Q9UH65	585 aa		12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	RIPK3	Q9Y572	518 aa		12.44	□□□□□ -0.42
RRP12-215	ENST00000622320	ZDBF2	Q9HCK1	2354 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	PNMA6E	A0A0J9YXQ4	647 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	POTEB3	A0JP26	581 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	LCHN	A4D1U4	455 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	GNAI2	P04899	355 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	CYP2D6	P10635	497 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	CYP2C9	P11712	490 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	PTGS1	P23219	599 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	FOXK2	Q01167	660 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	TNFAIP2	Q03169	654 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	POTEB	Q6S5H4	581 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	FTSJ3	Q8IY81	847 aa	Known RBP	12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	CCDC144CP	Q8IYA2	1237 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	CRNKL1	Q9BZJ0	848 aa	Known RBP	12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	GOPC	Q9HD26	462 aa		12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	GREB1L	Q9C091	1923 aa	Predicted RBP	12.43	□□□□□ -0.42
RRP12-215	ENST00000622320	TNKS	O95271	1327 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	GRXCR2	A6NFK2	248 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	RAD21	O60216	631 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	ZEB2	O60315	1214 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	RFC2	P35250	354 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	SLC4A3	P48751	1232 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	PRSS33	Q8NF86	280 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	PANK1	Q8TE04	598 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	DYNLL2	Q96FJ2	89 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	SLF1	Q9BQI6	1058 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	AP5M1	Q9H0R1	490 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	TRMT13	Q9NUP7	481 aa	Known RBP	12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	TLR7	Q9NYK1	1049 aa	Known RBP	12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	DBNL	Q9UJU6	430 aa	Known RBP	12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	MTUS1	Q9ULD2	1270 aa		12.42	□□□□□ -0.42
RRP12-215	ENST00000622320	GNE	Q9Y223	722 aa	Known RBP	12.42	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms