RNA–Protein interactions for RNA: ENST00000622134.4

COL25A1-209, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 4,819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-209ENST00000622134 GAS7O60861 476 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 FDX1P10109 184 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 ABCD1P33897 745 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 FRMPD1Q5SYB0 1578 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 SRLQ86TD4 932 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 CCDC51Q96ER9 411 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 FAN1Q9Y2M0 1017 aa11.55□□□□□ -0.56
COL25A1-209ENST00000622134 CDHR2Q9BYE9 1310 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 MXRA7P84157 204 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 SLC20A2Q08357 652 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 MUM1L1Q5H9M0 696 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 INTS8Q75QN2 995 aaKnown RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 ZNF354CQ86Y25 554 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 LMBR1Q8WVP7 490 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 ARHGEF1Q92888 912 aaKnown RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 ACTR5Q9H9F9 607 aaPredicted RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 GUCY2CP25092 1073 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 MMP14P50281 582 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 CTNNBL1Q8WYA6 563 aaPredicted RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 KIFAP3Q92845 792 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 CRAMP1Q96RY5 1269 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 SEC62Q99442 399 aaKnown RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 PPP1R12CQ9BZL4 782 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 PKD2L1Q9P0L9 805 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 CLTCQ00610 1675 aaKnown RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 CPS1P31327 1500 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 SOS2Q07890 1332 aaPredicted RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 MACROD2A1Z1Q3 448 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 IRX1P78414 480 aaPredicted RBP11.54□□□□□ -0.56
COL25A1-209ENST00000622134 BIRC3Q13489 604 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 USH1GQ495M9 461 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 CNNM4Q6P4Q7 775 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 SLFN12Q8IYM2 578 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 STMN2Q93045 179 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 TRPC6Q9Y210 931 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 GINS2Q9Y248 185 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 DLC1Q96QB1 1528 aa11.54□□□□□ -0.56
COL25A1-209ENST00000622134 SGSM2O43147 1006 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 CALUO43852 315 aaPredicted RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 STAMBPO95630 424 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 SATB1Q01826 763 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 RNF10Q8N5U6 811 aaKnown RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 CEP120Q8N960 986 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 ZBTB9Q96C00 473 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TRIM4Q9C037 500 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 RABEP2Q9H5N1 569 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 CEP170BQ9Y4F5 1589 aaPredicted RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 A0A1W2PRG0 241 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 HIP1RO75146 1068 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 AFMP43652 599 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 MAP7Q14244 749 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TRMT2AQ8IZ69 625 aaKnown RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 SLC17A8Q8NDX2 589 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TCEANC2Q96MN5 208 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TSNARE1Q96NA8 513 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TMEM51Q9NW97 253 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 CDC23Q9UJX2 597 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 SLC27A2O14975 620 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TTLL1O95922 423 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 VIMP08670 466 aaKnown RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TFDP1Q14186 410 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 DBN1Q16643 649 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 CHST3Q7LGC8 479 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 MLKLQ8NB16 471 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 ZSCAN10Q96SZ4 725 aaPredicted RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 LRWD1Q9UFC0 647 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 SUFUQ9UMX1 484 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 PNMA1Q8ND90 353 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 DEPTORQ8TB45 409 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 DHX58Q96C10 678 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 SAAL1Q96ER3 474 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 TM6SF1Q9BZW5 370 aa11.53□□□□□ -0.56
COL25A1-209ENST00000622134 GPBP1L1Q9HC44 474 aaPredicted RBP11.53□□□□□ -0.56
COL25A1-209ENST00000622134 A0A1B0GVL5 298 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 RNF40O75150 1001 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 ATF7P17544 494 aaPredicted RBP11.52□□□□□ -0.56
COL25A1-209ENST00000622134 ATP5DP30049 168 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 MTMR3Q13615 1198 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 SUSD4Q5VX71 490 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 GBP5Q96PP8 586 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 NRBP1Q9UHY1 535 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 SNX14Q9Y5W7 946 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 RGS12O14924 1447 aa11.52□□□□□ -0.56
COL25A1-209ENST00000622134 CTIFO43310 598 aaKnown RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 GKAP1Q5VSY0 366 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 NCAPH2Q6IBW4 605 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 SH3GL3Q99963 347 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 PSTPIP2Q9H939 334 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 DIP2AQ14689 1571 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 TESPA1A2RU30 521 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 TMEM232C9JQI7 657 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 CHMP2AO43633 222 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 SMIM24O75264 130 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 CYP19A1P11511 503 aaPredicted RBP11.52□□□□□ -0.57
COL25A1-209ENST00000622134 PPP1R7Q15435 360 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 TTC38Q5R3I4 469 aa11.52□□□□□ -0.57
COL25A1-209ENST00000622134 SMC6Q96SB8 1091 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms