RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 RIPOR2Q9Y4F9 1068 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 IKBKGQ9Y6K9 419 aa10.26□□□□□ -0.77
GGA3-223ENST00000621870 AGLP35573 1532 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 PTPRUQ92729 1446 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 INO80B-WBP1J3KQ70 363 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 K7ENM7 598 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 GRIPAP1Q4V328 841 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 NOX5Q96PH1 765 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 APOL6Q9BWW8 343 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 INO80BQ9C086 356 aaPredicted RBP10.25□□□□□ -0.77
GGA3-223ENST00000621870 SLC39A2Q9NP94 309 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 CNOT7Q9UIV1 285 aaKnown RBP10.25□□□□□ -0.77
GGA3-223ENST00000621870 KCNG1Q9UIX4 513 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 ZNRF3Q9ULT6 936 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 PCDHA7Q9UN72 937 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 SH2B2O14492 632 aaPredicted RBP10.25□□□□□ -0.77
GGA3-223ENST00000621870 NR1I2O75469 434 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 DLATP10515 647 aaKnown RBP10.25□□□□□ -0.77
GGA3-223ENST00000621870 LIFRP42702 1097 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 ZNF569Q5MCW4 686 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 FAM26FQ5R3K3 315 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 MAATS1Q7Z4T9 603 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 ZNF34Q8IZ26 560 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 MYOCDQ8IZQ8 938 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 OTUD6BQ8N6M0 293 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 CLIC4Q9Y696 253 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 PRPF6O94906 941 aaKnown RBP10.25□□□□□ -0.77
GGA3-223ENST00000621870 ATP6V0A1Q93050 837 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 BAG1Q99933 345 aaPredicted RBP10.25□□□□□ -0.77
GGA3-223ENST00000621870 SEPT9Q9UHD8 586 aaPredicted RBP10.25□□□□□ -0.77
GGA3-223ENST00000621870 RABGAP1Q9Y3P9 1069 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 COL4A3BPQ9Y5P4 624 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 LMTK2Q8IWU2 1503 aa10.25□□□□□ -0.77
GGA3-223ENST00000621870 CTAGE15A4D2H0 777 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 IQCA1LA6NCM1 817 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 KIAA0754O94854 1291 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 CTAGE8P0CG41 777 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 MCM3P25205 808 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 NOLC1Q14978 699 aaKnown RBP eCLIP10.24□□□□□ -0.775e-6■□□□□ 9.2
GGA3-223ENST00000621870 NECTIN1Q15223 517 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 SF3B3Q15393 1217 aaKnown RBP10.24□□□□□ -0.77
GGA3-223ENST00000621870 FAM83BQ5T0W9 1011 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 CTAGE6Q86UF2 777 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 FAM160B2Q86V87 743 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 CTAGE4Q8IX94 777 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 ZBTB9Q96C00 473 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 CRAMP1Q96RY5 1269 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 CBX8Q9HC52 389 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 PNMA3Q9UL41 463 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 MADDQ8WXG6 1647 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 NMT2O60551 498 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 CSPG5O95196 566 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 PLEKHA8P1O95397 391 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 RASA3Q14644 834 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 PRAMEF18Q5VWM3 479 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 SESTD1Q86VW0 696 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 MICALL2Q8IY33 904 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 TMEM47Q9BQJ4 181 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 GJB4Q9NTQ9 266 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 KIAA1468Q9P260 1216 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 ANKFY1Q9P2R3 1169 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 MROH7-TTC4A0A0A0MT08 1334 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 E9PCH4 1651 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 DPEP1P16444 411 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 YARSP54577 528 aaKnown RBP10.24□□□□□ -0.77
GGA3-223ENST00000621870 NLRP12P59046 1061 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 DCUN1D2Q6PH85 259 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 SYMPKQ92797 1274 aaKnown RBP10.24□□□□□ -0.77
GGA3-223ENST00000621870 CEP95Q96GE4 821 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.24□□□□□ -0.779e-6■■□□□ 14.3
GGA3-223ENST00000621870 ARMCX3Q9UH62 379 aaPredicted RBP10.24□□□□□ -0.77
GGA3-223ENST00000621870 PCDHA4Q9UN74 947 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 AKT3Q9Y243 479 aa10.24□□□□□ -0.77
GGA3-223ENST00000621870 V9GYY5 206 aaPredicted RBP10.24□□□□□ -0.77
GGA3-223ENST00000621870 CTAGE9A4FU28 777 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 HNRNPDLO14979 420 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 CD2BP2O95400 341 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 ARMCX5Q6P1M9 558 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 CCDC84Q86UT8 332 aaPredicted RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 FMNL3Q8IVF7 1028 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.23□□□□□ -0.77
GGA3-223ENST00000621870 CEP170P1Q96L14 293 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 TTC14Q96N46 770 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 FTOQ9C0B1 505 aaKnown RBP eCLIP10.23□□□□□ -0.77
GGA3-223ENST00000621870 RBSNQ9H1K0 784 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 LMBRD1Q9NUN5 540 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 CWC15Q9P013 229 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 USP17L5A8MUK1 530 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 F5H6K3 240 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 MEIS1O00470 390 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 XRCC5P13010 732 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 ARL1P40616 181 aaPredicted RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 RNASE9P60153 205 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 CACNB1Q02641 598 aaPredicted RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 KLRC3Q07444 240 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 FAM160B1Q5W0V3 765 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 TMEM63CQ9P1W3 806 aa10.23□□□□□ -0.77
GGA3-223ENST00000621870 PPRC1Q5VV67 1664 aaKnown RBP10.23□□□□□ -0.77
GGA3-223ENST00000621870 UBN2Q6ZU65 1347 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms