RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 SLC16A2P36021 539 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 CCDC174Q6PII3 467 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 C7orf61Q8IZ16 206 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 ANKRD35Q8N283 1001 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 GPCPD1Q9NPB8 672 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 FBXO40Q9UH90 709 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 NRBP1Q9UHY1 535 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 CTNNA3Q9UI47 895 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 MCM3APO60318 1980 aa21.14■□□□□ 0.97
SCAMP4-213ENST00000621748 FRMPD2Q68DX3 1309 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 KDM4AO75164 1064 aa21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 ZNF865P0CJ78 1059 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 PDHBP11177 359 aa21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 IMMTQ16891 758 aaKnown RBP21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 GJC2Q5T442 439 aaPredicted RBP21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 BTNL9Q6UXG8 535 aa21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 FGD4Q96M96 766 aa21.13■□□□□ 0.97
SCAMP4-213ENST00000621748 B4E1Z4 1266 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 DNM1LO00429 736 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 SNAI1O95863 264 aaPredicted RBP21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 LRRC26Q2I0M4 334 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 MAMDC4Q6UXC1 1216 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 TRERF1Q96PN7 1200 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 SENP6Q9GZR1 1112 aaPredicted RBP21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 ACAD9Q9H845 621 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 RNF146Q9NTX7 359 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 ZSWIM5Q9P217 1185 aa21.12■□□□□ 0.97
SCAMP4-213ENST00000621748 RAD50Q92878 1312 aa21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 ALAS1P13196 640 aa21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 CNTN2Q02246 1040 aa21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 SYDE2Q5VT97 1194 aa21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 ZNF467Q7Z7K2 595 aaPredicted RBP21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 DGKHQ86XP1 1220 aa21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 MSL3Q8N5Y2 521 aaKnown RBP21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 ARRDC4Q8NCT1 418 aa21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 RANBP17Q9H2T7 1088 aaKnown RBP21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 PRO3102Q9H379 93 aa21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 RBM27Q9P2N5 1060 aaKnown RBP21.11■□□□□ 0.97
SCAMP4-213ENST00000621748 SYNGAP1Q96PV0 1343 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 SNHG28P0DPA3 235 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 NT5C2P49902 561 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 PTH1RQ03431 593 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 TKFCQ3LXA3 575 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 MUM1L1Q5H9M0 696 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 IQCA1Q86XH1 822 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 RUFY2Q8WXA3 655 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 A1CFQ9NQ94 594 aaKnown RBP21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 ZMYND8Q9ULU4 1186 aaPredicted RBP21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 CNPY2Q9Y2B0 182 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 GTF3C3Q9Y5Q9 886 aa21.1■□□□□ 0.97
SCAMP4-213ENST00000621748 MYCNP04198 464 aaPredicted RBP21.09■□□□□ 0.97
SCAMP4-213ENST00000621748 ZNF543Q08ER8 600 aa21.09■□□□□ 0.97
SCAMP4-213ENST00000621748 LRRC41Q15345 812 aa21.09■□□□□ 0.97
SCAMP4-213ENST00000621748 FAM133AQ8N9E0 248 aa21.09■□□□□ 0.97
SCAMP4-213ENST00000621748 ANKS1AQ92625 1134 aa21.09■□□□□ 0.97
SCAMP4-213ENST00000621748 ZSCAN10Q96SZ4 725 aaPredicted RBP21.09■□□□□ 0.97
SCAMP4-213ENST00000621748 CCPG1Q9ULG6 757 aa21.09■□□□□ 0.97
SCAMP4-213ENST00000621748 POTEB2H3BUK9 544 aa21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 ICAM1P05362 532 aa21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 RARBP10826 455 aa21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 SYN1P17600 705 aa21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 CCDC178Q5BJE1 867 aa21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 ENAHQ8N8S7 591 aaPredicted RBP21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 LENG1Q96BZ8 264 aaPredicted RBP21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 KRT23Q9C075 422 aa21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 XPNPEP3Q9NQH7 507 aa21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.08■□□□□ 0.97
SCAMP4-213ENST00000621748 KBTBD13C9JR72 458 aa21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 SGSM2O43147 1006 aa21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 GOLGA8HP0CJ92 632 aa21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 AKR1A1P14550 325 aa21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 ATN1P54259 1190 aaPredicted RBP21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 PNMA1Q8ND90 353 aa21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 CNNM2Q9H8M5 875 aa21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 PCDH10Q9P2E7 1040 aa21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 ZHX1Q9UKY1 873 aaPredicted RBP21.07■□□□□ 0.96
SCAMP4-213ENST00000621748 SOWAHBA6NEL2 793 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 PGK1P00558 417 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 CYP21A2P08686 494 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 FXR1P51114 621 aaKnown RBP eCLIP21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 ACVR2BQ13705 512 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 ARMCX2Q7L311 632 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 CCDC144CPQ8IYA2 1237 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 KAT14Q9H8E8 782 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 CYP39A1Q9NYL5 469 aa21.06■□□□□ 0.96
SCAMP4-213ENST00000621748 TNKSO95271 1327 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 ADCYAP1R1P41586 468 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 GPATCH4Q5T3I0 446 aaKnown RBP21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 SKAP1Q86WV1 359 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 UBA5Q9GZZ9 404 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 KATNBL1Q9H079 304 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 CPVLQ9H3G5 476 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 ABHD16BQ9H3Z7 469 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 FAM184BQ9ULE4 1060 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 TAF6LQ9Y6J9 622 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 LCTP09848 1927 aa21.05■□□□□ 0.96
SCAMP4-213ENST00000621748 ASTN1O14525 1302 aa21.04■□□□□ 0.96
SCAMP4-213ENST00000621748 NSMFQ6X4W1 530 aa21.04■□□□□ 0.96
SCAMP4-213ENST00000621748 SLC39A5Q6ZMH5 540 aa21.04■□□□□ 0.96
SCAMP4-213ENST00000621748 CYB5R4Q7L1T6 521 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms